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2cmu
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2cmu" size="450" color="white" frame="true" align="right" spinBox="true" caption="2cmu, resolution 2.50Å" /> '''CRYSTAL STRUCTURE OF...) |
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| - | [[Image:2cmu.gif|left|200px]]<br /><applet load="2cmu" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2cmu, resolution 2.50Å" /> | ||
| - | '''CRYSTAL STRUCTURE OF A PUTATIVE PEPTIDYL-ARGININE DEIMINASE'''<br /> | ||
| - | == | + | ==Crystal structure of a putative peptidyl-arginine deiminase== |
| - | + | <StructureSection load='2cmu' size='340' side='right'caption='[[2cmu]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [[ | + | <table><tr><td colspan='2'>[[2cmu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1x72 1x72]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CMU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CMU FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cmu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cmu OCA], [https://pdbe.org/2cmu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cmu RCSB], [https://www.ebi.ac.uk/pdbsum/2cmu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cmu ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2cmu TOPSAN]</span></td></tr> |
| - | [ | + | </table> |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/O24890_HELPY O24890_HELPY] |
| - | [ | + | == Evolutionary Conservation == |
| - | [[ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | [[ | + | <jmolCheckbox> |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/2cmu_consurf.spt"</scriptWhenChecked> |
| - | [[Category: | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cmu ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: | + | __TOC__ |
| - | + | </StructureSection> | |
| - | + | [[Category: Helicobacter pylori 26695]] | |
| + | [[Category: Large Structures]] | ||
| + | [[Category: Kniewel R]] | ||
| + | [[Category: Lima CD]] | ||
| + | [[Category: Rajashankar KR]] | ||
| + | [[Category: Solorzano V]] | ||
Current revision
Crystal structure of a putative peptidyl-arginine deiminase
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