This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2cqq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:29, 22 May 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cqq.gif|left|200px]]
 
-
{{Structure
+
==Solution Structure of RSGI RUH-037, a myb DNA-binding domain in human cDNA==
-
|PDB= 2cqq |SIZE=350|CAPTION= <scene name='initialview01'>2cqq</scene>
+
<StructureSection load='2cqq' size='340' side='right'caption='[[2cqq]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2cqq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CQQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CQQ FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= AY225122 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cqq OCA], [https://pdbe.org/2cqq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cqq RCSB], [https://www.ebi.ac.uk/pdbsum/2cqq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cqq ProSAT], [https://www.topsan.org/Proteins/RSGI/2cqq TOPSAN]</span></td></tr>
-
}}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DNJC1_HUMAN DNJC1_HUMAN] May modulate protein synthesis (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cq/2cqq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cqq ConSurf].
 +
<div style="clear:both"></div>
-
'''Solution Structure of RSGI RUH-037, a myb DNA-binding domain in human cDNA'''
+
==See Also==
-
 
+
*[[DnaJ homolog 3D structures|DnaJ homolog 3D structures]]
-
 
+
__TOC__
-
==Disease==
+
</StructureSection>
-
Known disease associated with this structure: 3-methylglutaconic aciduria, type V OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=608977 608977]]
+
-
 
+
-
==About this Structure==
+
-
2CQQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CQQ OCA].
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Doi-Katayama, Y.]]
+
[[Category: Doi-Katayama Y]]
-
[[Category: Hayashi, F.]]
+
[[Category: Hayashi F]]
-
[[Category: Hirota, H.]]
+
[[Category: Hirota H]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S.]]
+
-
[[Category: membrane protein]]
+
-
[[Category: national project on protein structural and functional analyse]]
+
-
[[Category: nppsfa]]
+
-
[[Category: riken structural genomics/proteomics initiative]]
+
-
[[Category: rsgi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:18:45 2008''
+

Current revision

Solution Structure of RSGI RUH-037, a myb DNA-binding domain in human cDNA

PDB ID 2cqq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools