This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2cy4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:32, 22 May 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)==
==Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)==
-
<StructureSection load='2cy4' size='340' side='right' caption='[[2cy4]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
+
<StructureSection load='2cy4' size='340' side='right'caption='[[2cy4]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2cy4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CY4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2CY4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2cy4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CY4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CY4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cy5|2cy5]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cy4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cy4 OCA], [https://pdbe.org/2cy4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cy4 RCSB], [https://www.ebi.ac.uk/pdbsum/2cy4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cy4 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cy4 TOPSAN]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cy4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cy4 OCA], [http://pdbe.org/2cy4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2cy4 RCSB], [http://www.ebi.ac.uk/pdbsum/2cy4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2cy4 ProSAT], [http://www.topsan.org/Proteins/RSGI/2cy4 TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ES8L1_MOUSE ES8L1_MOUSE] Stimulates guanine exchange activity of SOS1. May play a role in membrane ruffling and remodeling of the actin cytoskeleton (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 19: Line 20:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cy4 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cy4 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
 +
 +
==See Also==
 +
*[[Epidermal growth factor receptor substrate 3D structures|Epidermal growth factor receptor substrate 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Large Structures]]
-
[[Category: Hamana, H]]
+
[[Category: Mus musculus]]
-
[[Category: Kinoshita, Y]]
+
[[Category: Hamana H]]
-
[[Category: Mizohata, E]]
+
[[Category: Kinoshita Y]]
-
[[Category: Morita, S]]
+
[[Category: Mizohata E]]
-
[[Category: Nagano, K]]
+
[[Category: Morita S]]
-
[[Category: Structural genomic]]
+
[[Category: Nagano K]]
-
[[Category: Shirouzu, M]]
+
[[Category: Shirouzu M]]
-
[[Category: Terada, T]]
+
[[Category: Terada T]]
-
[[Category: Uda, H]]
+
[[Category: Uda H]]
-
[[Category: Yokoyama, S]]
+
[[Category: Yokoyama S]]
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Phosphorylation]]
+
-
[[Category: Ptb domain]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Signal transduction]]
+
-
[[Category: Signaling protein]]
+

Current revision

Crystal structure of phosphotyrosine binding (PTB) domain of epidermal growth factor receptor pathway substrate-8 (EPS8) related protein 1 from Mus musculus (form-1 crystal)

PDB ID 2cy4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools