This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2d56
From Proteopedia
(Difference between revisions)
| (12 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2d56.gif|left|200px]]<br /><applet load="2d56" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2d56" /> | ||
| - | '''Solution Structure of ASABF, Antibacterial Peptide Isolated from a Nematode, Ascaris Suum'''<br /> | ||
| - | == | + | ==Solution Structure of ASABF, Antibacterial Peptide Isolated from a Nematode, Ascaris Suum== |
| - | + | <StructureSection load='2d56' size='340' side='right'caption='[[2d56]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2d56]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Ascaris_suum Ascaris suum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D56 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D56 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d56 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d56 OCA], [https://pdbe.org/2d56 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d56 RCSB], [https://www.ebi.ac.uk/pdbsum/2d56 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d56 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/P90683_ASCSU P90683_ASCSU] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d5/2d56_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d56 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Ascaris suum]] | [[Category: Ascaris suum]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Aizawa | + | [[Category: Aizawa T]] |
| - | [[Category: Demura | + | [[Category: Demura M]] |
| - | [[Category: Kamiya | + | [[Category: Kamiya M]] |
| - | [[Category: Kawano | + | [[Category: Kawano K]] |
| - | [[Category: Kumaki | + | [[Category: Kumaki Y]] |
| - | [[Category: Miura | + | [[Category: Miura K]] |
| - | [[Category: Nakano | + | [[Category: Nakano M]] |
| - | [[Category: Tsuda | + | [[Category: Tsuda S]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Solution Structure of ASABF, Antibacterial Peptide Isolated from a Nematode, Ascaris Suum
| |||||||||||
Categories: Ascaris suum | Large Structures | Aizawa T | Demura M | Kamiya M | Kawano K | Kumaki Y | Miura K | Nakano M | Tsuda S
