2d8z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:35, 22 May 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2d8z.gif|left|200px]]<br /><applet load="2d8z" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2d8z" />
 
-
'''Solution structure of the third LIM domain of Four and a half LIM domains protein 2 (FHL-2)'''<br />
 
-
==About this Structure==
+
==Solution structure of the third LIM domain of Four and a half LIM domains protein 2 (FHL-2)==
-
2D8Z is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=ZN:'>ZN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D8Z OCA].
+
<StructureSection load='2d8z' size='340' side='right'caption='[[2d8z]]' scene=''>
-
[[Category: Homo sapiens]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2d8z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D8Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D8Z FirstGlance]. <br>
-
[[Category: Hayashi, F.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
[[Category: Qin, X R.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d8z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d8z OCA], [https://pdbe.org/2d8z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d8z RCSB], [https://www.ebi.ac.uk/pdbsum/2d8z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d8z ProSAT], [https://www.topsan.org/Proteins/RSGI/2d8z TOPSAN]</span></td></tr>
-
[[Category: Yokoyama, S.]]
+
</table>
-
[[Category: ZN]]
+
== Function ==
-
[[Category: four and a half lim domains protein 2]]
+
[https://www.uniprot.org/uniprot/FHL2_HUMAN FHL2_HUMAN] May function as a molecular transmitter linking various signaling pathways to transcriptional regulation. Negatively regulates the transcriptional repressor E4F1 and may function in cell growth. Inhibits the transcriptional activity of FOXO1 and its apoptotic function by enhancing the interaction of FOXO1 with SIRT1 and FOXO1 deacetylation.<ref>PMID:15692560</ref> <ref>PMID:16652157</ref> <ref>PMID:18853468</ref>
-
[[Category: lim domain]]
+
== Evolutionary Conservation ==
-
[[Category: lim-domain protein dral]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: national project on protein structural and functional analyses]]
+
Check<jmol>
-
[[Category: nppsfa]]
+
<jmolCheckbox>
-
[[Category: riken structural genomics/proteomics initiative]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d8/2d8z_consurf.spt"</scriptWhenChecked>
-
[[Category: rsgi]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: skeletal muscle lim-protein 3]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: structural genomics]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d8z ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:56:18 2008''
+
==See Also==
 +
*[[Muscle LIM protein|Muscle LIM protein]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Hayashi F]]
 +
[[Category: Qin XR]]
 +
[[Category: Yokoyama S]]

Current revision

Solution structure of the third LIM domain of Four and a half LIM domains protein 2 (FHL-2)

PDB ID 2d8z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools