This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wii

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:20, 29 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1wii.png|left|200px]]
 
-
<!--
+
==Solution structure of RSGI RUH-025, a DUF701 domain from mouse cDNA==
-
The line below this paragraph, containing "STRUCTURE_1wii", creates the "Structure Box" on the page.
+
<StructureSection load='1wii' size='340' side='right'caption='[[1wii]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1wii]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WII OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WII FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1wii| PDB=1wii | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wii FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wii OCA], [https://pdbe.org/1wii PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wii RCSB], [https://www.ebi.ac.uk/pdbsum/1wii PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wii ProSAT], [https://www.topsan.org/Proteins/RSGI/1wii TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Solution structure of RSGI RUH-025, a DUF701 domain from mouse cDNA===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/ELOF1_MOUSE ELOF1_MOUSE] Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions (By similarity).
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1WII is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WII OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wi/1wii_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wii ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Abe, T.]]
+
[[Category: Abe T]]
-
[[Category: Hayashi, H.]]
+
[[Category: Hayashi H]]
-
[[Category: Hirota, H.]]
+
[[Category: Hirota H]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Domain of unknown function]]
+
-
[[Category: Metal-binding protein]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Zinc finger]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 17:52:53 2008''
+

Current revision

Solution structure of RSGI RUH-025, a DUF701 domain from mouse cDNA

PDB ID 1wii

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools