This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2g2b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (18:58, 29 May 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2g2b.gif|left|200px]]<br /><applet load="2g2b" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2g2b" />
 
-
'''NMR structure of the human allograft inflammatory factor 1'''<br />
 
-
==Disease==
+
==NMR structure of the human allograft inflammatory factor 1==
-
Known disease associated with this structure: Polycystic liver disease OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=177060 177060]]
+
<StructureSection load='2g2b' size='340' side='right'caption='[[2g2b]]' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[2g2b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G2B FirstGlance]. <br>
-
2G2B is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G2B OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g2b OCA], [https://pdbe.org/2g2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g2b RCSB], [https://www.ebi.ac.uk/pdbsum/2g2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g2b ProSAT], [https://www.topsan.org/Proteins/CESG/2g2b TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AIF1_HUMAN AIF1_HUMAN] Actin-binding protein that enhances membrane ruffling and RAC activation. Enhances the actin-bundling activity of LCP1. Binds calcium. Plays a role in RAC signaling and in phagocytosis. May play a role in macrophage activation and function. Promotes the proliferation of vascular smooth muscle cells and of T-lymphocytes. Enhances lymphocyte migration. Plays a role in vascular inflammation.<ref>PMID:15117732</ref> <ref>PMID:16049345</ref> <ref>PMID:18699778</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g2/2g2b_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g2b ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+
[[Category: Markley JL]]
-
[[Category: Markley, J L.]]
+
[[Category: Newman CL]]
-
[[Category: Newman, C L.]]
+
[[Category: Song J]]
-
[[Category: Song, J.]]
+
[[Category: Tyler RC]]
-
[[Category: Tyler, R C.]]
+
[[Category: Vinarov D]]
-
[[Category: Vinarov, D.]]
+
-
[[Category: aif-1]]
+
-
[[Category: allograft inflammatory factor 1]]
+
-
[[Category: center for eukaryotic structural genomics]]
+
-
[[Category: cesg]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomics]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:27:25 2008''
+

Current revision

NMR structure of the human allograft inflammatory factor 1

PDB ID 2g2b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools