This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2gpf
From Proteopedia
(Difference between revisions)
| (14 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2gpf.jpg|left|200px]]<br /><applet load="2gpf" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2gpf" /> | ||
| - | '''Solution NMR Structure of Protein PA22412 from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium Target PaT86, Ontario Centre for Structural Proteomics Target PA2412.'''<br /> | ||
| - | == | + | ==Solution NMR Structure of Protein PA22412 from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium Target PaT86, Ontario Centre for Structural Proteomics Target PA2412.== |
| - | + | <StructureSection load='2gpf' size='340' side='right'caption='[[2gpf]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2gpf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GPF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GPF FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gpf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gpf OCA], [https://pdbe.org/2gpf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gpf RCSB], [https://www.ebi.ac.uk/pdbsum/2gpf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gpf ProSAT], [https://www.topsan.org/Proteins/NESGC/2gpf TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q9I169_PSEAE Q9I169_PSEAE] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gp/2gpf_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gpf ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Pseudomonas aeruginosa]] | [[Category: Pseudomonas aeruginosa]] | ||
| - | + | [[Category: Arrowsmith CH]] | |
| - | [[Category: Arrowsmith | + | [[Category: Lemak A]] |
| - | [[Category: Lemak | + | [[Category: Lukin JA]] |
| - | [[Category: Lukin | + | [[Category: Yee A]] |
| - | + | ||
| - | [[Category: Yee | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Solution NMR Structure of Protein PA22412 from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium Target PaT86, Ontario Centre for Structural Proteomics Target PA2412.
| |||||||||||
