This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hgk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:02, 29 May 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hgk.jpg|left|200px]]
 
-
{{Structure
+
==Solution NMR Structure of protein YqcC from E. coli: Northeast Structural Genomics Consortium target ER225==
-
|PDB= 2hgk |SIZE=350|CAPTION= <scene name='initialview01'>2hgk</scene>
+
<StructureSection load='2hgk' size='340' side='right'caption='[[2hgk]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2hgk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HGK FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= yqcC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hgk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hgk OCA], [https://pdbe.org/2hgk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hgk RCSB], [https://www.ebi.ac.uk/pdbsum/2hgk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hgk ProSAT], [https://www.topsan.org/Proteins/NESGC/2hgk TOPSAN]</span></td></tr>
-
}}
+
</table>
-
 
+
== Function ==
-
'''Solution NMR Structure of protein YqcC from E. coli: Northeast Structural Genomics Consortium target ER225'''
+
[https://www.uniprot.org/uniprot/YQCC_ECOLI YQCC_ECOLI]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2HGK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HGK OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hg/2hgk_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hgk ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T B.]]
+
[[Category: Acton TB]]
-
[[Category: Baran, M.]]
+
[[Category: Baran M]]
-
[[Category: Cort, J R.]]
+
[[Category: Cort JR]]
-
[[Category: Cunningham, K.]]
+
[[Category: Cunningham K]]
-
[[Category: Kennedy, M A.]]
+
[[Category: Kennedy MA]]
-
[[Category: Liu, J.]]
+
[[Category: Liu J]]
-
[[Category: Ma, L C.]]
+
[[Category: Ma LC]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione GT]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Rost B]]
-
[[Category: Rost, B.]]
+
[[Category: Shetty K]]
-
[[Category: Shetty, K.]]
+
[[Category: Swapna GVT]]
-
[[Category: Swapna, G V.T.]]
+
[[Category: Wang D]]
-
[[Category: Wang, D.]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R.]]
+
-
[[Category: helical bundle]]
+
-
[[Category: nesg]]
+
-
[[Category: northeast structural genomics consortium]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:16:48 2008''
+

Current revision

Solution NMR Structure of protein YqcC from E. coli: Northeast Structural Genomics Consortium target ER225

PDB ID 2hgk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools