2hgk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:02, 29 May 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2hgk.jpg|left|200px]]
 
-
{{Structure
+
==Solution NMR Structure of protein YqcC from E. coli: Northeast Structural Genomics Consortium target ER225==
-
|PDB= 2hgk |SIZE=350|CAPTION= <scene name='initialview01'>2hgk</scene>
+
<StructureSection load='2hgk' size='340' side='right'caption='[[2hgk]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2hgk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HGK FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= yqcC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hgk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hgk OCA], [https://pdbe.org/2hgk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hgk RCSB], [https://www.ebi.ac.uk/pdbsum/2hgk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hgk ProSAT], [https://www.topsan.org/Proteins/NESGC/2hgk TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3098 COG3098]</span>
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2hgk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hgk OCA], [http://www.ebi.ac.uk/pdbsum/2hgk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2hgk RCSB]</span>
+
[https://www.uniprot.org/uniprot/YQCC_ECOLI YQCC_ECOLI]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Solution NMR Structure of protein YqcC from E. coli: Northeast Structural Genomics Consortium target ER225'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hg/2hgk_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2HGK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HGK OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hgk ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T B.]]
+
[[Category: Acton TB]]
-
[[Category: Baran, M.]]
+
[[Category: Baran M]]
-
[[Category: Cort, J R.]]
+
[[Category: Cort JR]]
-
[[Category: Cunningham, K.]]
+
[[Category: Cunningham K]]
-
[[Category: Kennedy, M A.]]
+
[[Category: Kennedy MA]]
-
[[Category: Liu, J.]]
+
[[Category: Liu J]]
-
[[Category: Ma, L C.]]
+
[[Category: Ma LC]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione GT]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Rost B]]
-
[[Category: Rost, B.]]
+
[[Category: Shetty K]]
-
[[Category: Shetty, K.]]
+
[[Category: Swapna GVT]]
-
[[Category: Swapna, G V.T.]]
+
[[Category: Wang D]]
-
[[Category: Wang, D.]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R.]]
+
-
[[Category: helical bundle]]
+
-
[[Category: nesg]]
+
-
[[Category: northeast structural genomics consortium]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:30:10 2008''
+

Current revision

Solution NMR Structure of protein YqcC from E. coli: Northeast Structural Genomics Consortium target ER225

PDB ID 2hgk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools