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2hpu

From Proteopedia

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Current revision

Solution NMR structure of the apo-NosL protein from Achromobacter cycloclastes

Structural highlights

2hpu is a 1 chain structure with sequence from Achromobacter cycloclastes. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	Solution NMR
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NOSL_ACHCY May act as a metallochaperone involved in nitrous oxide reductase assembly. Specifically binds Cu(+).^[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The formation of the unique catalytic tetranuclear copper cluster (Cu(Z)) of nitrous oxide reductase, N(2)OR, requires the coexpression of a multiprotein assembly apparatus encoded by the nosDFYL operon. NosL, one of the proteins encoded by this transcript, is a 20 kDa lipoprotein of the periplasm that has been shown to bind copper(I), although its function has yet to be detemined. Cu(I) EXAFS data collected on the holo protein demonstrated that features of the copper binding site are consistent with a role for this protein as a metallochaperone, a class of metal ion transporters involved in metal resistance, homeostasis, and metallocluster biosynthesis. To test this hypothesis and to gain insight into other potential functional roles for this protein in the N(2)OR system, the three-dimensional solution structure of apo NosL has been solved by solution NMR methods. The structure of apo NosL consists of two relatively independent homologous domains that adopt an unusual betabetaalphabeta topology. The fold of apo NosL displays structural homology to only one other protein, MerB, an organomercury lyase involved in bacterial mercury resistance (Di Lello et al. (2004) Biochemistry 43, 8322-32). The structural similarity between apo NosL and MerB, together with the absolute conservation of Met109 in all NosL sequences, indicates that this residue may be involved in copper ligation, and that the metal binding site is likely to be solvent-accessible and contiguous with a large binding cleft. The structural observations suggest that NosL is exceptionally adapted for a role in copper and/or sulfur delivery and possibly for metallochaperone function.

Structural studies of Apo NosL, an accessory protein of the nitrous oxide reductase system: insights from structural homology with MerB, a mercury resistance protein.,Taubner LM, McGuirl MA, Dooley DM, Copie V Biochemistry. 2006 Oct 10;45(40):12240-52. PMID:17014077^[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ McGuirl MA, Bollinger JA, Cosper N, Scott RA, Dooley DM. Expression, purification, and characterization of NosL, a novel Cu(I) protein of the nitrous oxide reductase (nos) gene cluster. J Biol Inorg Chem. 2001 Feb;6(2):189-95. PMID:11293413 doi:10.1007/s007750000190
↑ Taubner LM, McGuirl MA, Dooley DM, Copie V. Structural studies of Apo NosL, an accessory protein of the nitrous oxide reductase system: insights from structural homology with MerB, a mercury resistance protein. Biochemistry. 2006 Oct 10;45(40):12240-52. PMID:17014077 doi:10.1021/bi061089+

1 Structural highlights
2 Function
3 Evolutionary Conservation
4 Publication Abstract from PubMed
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2hpu"

@@ Line 1: / Line 1: @@
 ==Solution NMR structure of the apo-NosL protein from Achromobacter cycloclastes==
-<StructureSection load='2hpu' size='340' side='right' caption='[[2hpu]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='2hpu' size='340' side='right'caption='[[2hpu]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2hpu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"achromobacter_cycloclastes"_(gray_and_thornton)_bergey_et_al. "achromobacter cycloclastes" (gray and thornton) bergey et al.]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HPU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2HPU FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2hpu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Achromobacter_cycloclastes Achromobacter cycloclastes]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HPU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HPU FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2hq3|2hq3]]</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nosL ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223 "Achromobacter cycloclastes" (Gray and Thornton) Bergey et al.])</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hpu OCA], [https://pdbe.org/2hpu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hpu RCSB], [https://www.ebi.ac.uk/pdbsum/2hpu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hpu ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2hpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hpu OCA], [http://pdbe.org/2hpu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2hpu RCSB], [http://www.ebi.ac.uk/pdbsum/2hpu PDBsum]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/NOSL_ACHCY NOSL_ACHCY] May act as a metallochaperone involved in nitrous oxide reductase assembly. Specifically binds Cu(+).<ref>PMID:11293413</ref>
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
   <jmolCheckbox>
-    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hp/2hpu_consurf.spt"</scriptWhenChecked>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hp/2hpu_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
-</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hpu ConSurf].
 <div style="clear:both"></div>
 <div style="background-color:#fffaf0;">
@@ Line 30: / Line 32: @@
 __TOC__
 </StructureSection>
-[[Category: Copie, V]]
+[[Category: Achromobacter cycloclastes]]
-[[Category: Dooley, D M]]
+[[Category: Large Structures]]
-[[Category: McGuirl, M A]]
+[[Category: Copie V]]
-[[Category: Taubner, L M]]
+[[Category: Dooley DM]]
-[[Category: Alpha beta topology]]
+[[Category: McGuirl MA]]
-[[Category: Metal transport]]
+[[Category: Taubner LM]]

2hpu

From Proteopedia

Current revision

Solution NMR structure of the apo-NosL protein from Achromobacter cycloclastes

Structural highlights

Function

Evolutionary Conservation

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

Views

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