This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2jx1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:06, 29 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2jx1.gif|left|200px]]
 
-
<!--
+
==Structure of the fifth zinc finger of Myelin Transcription Factor 1 in complex with RARE DNA==
-
The line below this paragraph, containing "STRUCTURE_2jx1", creates the "Structure Box" on the page.
+
<StructureSection load='2jx1' size='340' side='right'caption='[[2jx1]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2jx1]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JX1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JX1 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jx1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jx1 OCA], [https://pdbe.org/2jx1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jx1 RCSB], [https://www.ebi.ac.uk/pdbsum/2jx1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jx1 ProSAT]</span></td></tr>
-
{{STRUCTURE_2jx1| PDB=2jx1 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''Structure of the fifth zinc finger of Myelin Transcription Factor 1 in complex with RARE DNA'''
+
[https://www.uniprot.org/uniprot/MYT1_MOUSE MYT1_MOUSE] Binds to the promoter regions of proteolipid proteins of the central nervous system. May play a role in the development of neurons and oligodendrogalia in the CNS. May regulate a critical transition point in oligodendrocyte lineage development by modulating oligodendrocyte progenitor proliferation relative to terminal differentiation and up-regulation of myelin gene transcription (By similarity).<ref>PMID:9373037</ref>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2JX1 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JX1 OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jx/2jx1_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jx1 ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Protein complex]]
+
[[Category: Gamsjaeger R]]
-
[[Category: Gamsjaeger, R.]]
+
[[Category: Kobus FJ]]
-
[[Category: Kobus, F J.]]
+
[[Category: Kwan AH]]
-
[[Category: Kwan, A H.]]
+
[[Category: Lehtomaki E]]
-
[[Category: Lehtomaki, E.]]
+
[[Category: Lowry JA]]
-
[[Category: Lowry, J A.]]
+
[[Category: Mackay JP]]
-
[[Category: Mackay, J P.]]
+
[[Category: Matthews JM]]
-
[[Category: Matthews, J M.]]
+
[[Category: Swanton MK]]
-
[[Category: Swanton, M K.]]
+
-
[[Category: Protein-dna complex]]
+
-
[[Category: Transcription/dna complex]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 09:22:07 2008''
+

Current revision

Structure of the fifth zinc finger of Myelin Transcription Factor 1 in complex with RARE DNA

PDB ID 2jx1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools