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2z5v
From Proteopedia
(Difference between revisions)
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==Solution structure of the TIR domain of human MyD88== | ==Solution structure of the TIR domain of human MyD88== | ||
| - | <StructureSection load='2z5v' size='340' side='right'caption='[[2z5v | + | <StructureSection load='2z5v' size='340' side='right'caption='[[2z5v]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2z5v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2z5v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z5V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z5V FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z5v OCA], [https://pdbe.org/2z5v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z5v RCSB], [https://www.ebi.ac.uk/pdbsum/2z5v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z5v ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z5v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z5v OCA], [https://pdbe.org/2z5v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z5v RCSB], [https://www.ebi.ac.uk/pdbsum/2z5v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z5v ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Disease == | == Disease == | ||
| - | + | [https://www.uniprot.org/uniprot/MYD88_HUMAN MYD88_HUMAN] Defects in MYD88 are the cause of MYD88 deficiency (MYD88D) [MIM:[https://omim.org/entry/612260 612260]; also known as recurrent pyogenic bacterial infections due to MYD88 deficiency. Patients suffer from autosomal recessive, life-threatening, often recurrent pyogenic bacterial infections, including invasive pneumococcal disease, and die between 1 and 11 months of age. Surviving patients are otherwise healthy, with normal resistance to other microbes, and their clinical status improved with age.<ref>PMID:19506249</ref> <ref>PMID:18669862</ref> | |
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/MYD88_HUMAN MYD88_HUMAN] Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. Acts via IRAK1, IRAK2, IRF7 and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response. Increases IL-8 transcription. Involved in IL-18-mediated signaling pathway. Activates IRF1 resulting in its rapid migration into the nucleus to mediate an efficient induction of IFN-beta, NOS2/INOS, and IL12A genes (By similarity).<ref>PMID:9013863</ref> <ref>PMID:15361868</ref> <ref>PMID:18292575</ref> <ref>PMID:19506249</ref> | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Hiroaki | + | [[Category: Hiroaki H]] |
| - | [[Category: Kato | + | [[Category: Kato Z]] |
| - | [[Category: Kondo | + | [[Category: Kondo N]] |
| - | [[Category: Ohnishi | + | [[Category: Ohnishi H]] |
| - | [[Category: Shirakawa | + | [[Category: Shirakawa M]] |
| - | [[Category: Tochio | + | [[Category: Tochio H]] |
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Current revision
Solution structure of the TIR domain of human MyD88
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Categories: Homo sapiens | Large Structures | Hiroaki H | Kato Z | Kondo N | Ohnishi H | Shirakawa M | Tochio H

