7avb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:11, 19 June 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7avb' size='340' side='right'caption='[[7avb]]' scene=''>
<StructureSection load='7avb' size='340' side='right'caption='[[7avb]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7avb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AVB FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AVB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AVB FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7avb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7avb OCA], [https://pdbe.org/7avb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7avb RCSB], [https://www.ebi.ac.uk/pdbsum/7avb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7avb ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7avb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7avb OCA], [https://pdbe.org/7avb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7avb RCSB], [https://www.ebi.ac.uk/pdbsum/7avb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7avb ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
One of the essential characteristics of any tag used in bioscience and medical applications is its size. The larger the label, the more it may affect the studied object, and the more it may distort its behavior. In this paper, using NMR spectroscopy and X-ray crystallography, we have studied the structure of fluorogen-activating protein FAST both in the apo form and in complex with the fluorogen. We showed that significant change in the protein occurs upon interaction with the ligand. While the protein is completely ordered in the complex, its apo form is characterized by higher mobility and disordering of its N-terminus. We used structural information to design the shortened FAST (which we named nanoFAST) by truncating 26 N-terminal residues. Thus, we created the shortest genetically encoded tag among all known fluorescent and fluorogen-activating proteins, which is composed of only 98 amino acids.
 
- 
-
NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids.,Mineev KS, Goncharuk SA, Goncharuk MV, Povarova NV, Sokolov AI, Baleeva NS, Smirnov AY, Myasnyanko IN, Ruchkin DA, Bukhdruker S, Remeeva A, Mishin A, Borshchevskiy V, Gordeliy V, Arseniev AS, Gorbachev DA, Gavrikov AS, Mishin AS, Baranov MS Chem Sci. 2021 Apr 8;12(19):6719-6725. doi: 10.1039/d1sc01454d. PMID:34040747<ref>PMID:34040747</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 7avb" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Synthetic construct]]
 
[[Category: Baranov MS]]
[[Category: Baranov MS]]
[[Category: Goncharuk SA]]
[[Category: Goncharuk SA]]
[[Category: Mineev KS]]
[[Category: Mineev KS]]

Current revision

Solution structure of the fluorogen-activating protein FAST in the apo state

PDB ID 7avb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools