1svk

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[[Image:1svk.gif|left|200px]]
[[Image:1svk.gif|left|200px]]
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{{Structure
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|PDB= 1svk |SIZE=350|CAPTION= <scene name='initialview01'>1svk</scene>, resolution 2.00&Aring;
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The line below this paragraph, containing "STRUCTURE_1svk", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=ALF:TETRAFLUOROALUMINATE+ION'>ALF</scene>, <scene name='pdbligand=GDP:GUANOSINE-5&#39;-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Heterotrimeric_G-protein_GTPase Heterotrimeric G-protein GTPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.5.1 3.6.5.1] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= GNAI1, GNAI-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Rattus norvegicus])
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|DOMAIN=
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{{STRUCTURE_1svk| PDB=1svk | SCENE= }}
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|RELATEDENTRY=[[1bof|1BOF]], [[1gfi|1GFI]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1svk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1svk OCA], [http://www.ebi.ac.uk/pdbsum/1svk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1svk RCSB]</span>
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'''Structure of the K180P mutant of Gi alpha subunit bound to AlF4 and GDP'''
'''Structure of the K180P mutant of Gi alpha subunit bound to AlF4 and GDP'''
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[[Category: Thomas, C J.]]
[[Category: Thomas, C J.]]
[[Category: Wang, Y.]]
[[Category: Wang, Y.]]
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[[Category: active form]]
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[[Category: Active form]]
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[[Category: gi alpha subunit]]
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[[Category: Gi alpha subunit]]
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[[Category: k180p mutation]]
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[[Category: K180p mutation]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 09:11:16 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:47:33 2008''
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Revision as of 06:11, 3 May 2008

Template:STRUCTURE 1svk

Structure of the K180P mutant of Gi alpha subunit bound to AlF4 and GDP


Overview

Heterotrimeric G protein alpha (G alpha) subunits possess intrinsic GTPase activity that leads to functional deactivation with a rate constant of approximately 2 min(-1) at 30 degrees C. GTP hydrolysis causes conformational changes in three regions of G alpha, including Switch I and Switch II. Mutation of G202-->A in Switch II of G alpha(i1) accelerates the rates of both GTP hydrolysis and conformational change, which is measured by the loss of fluorescence from Trp-211 in Switch II. Mutation of K180-->P in Switch I increases the rate of conformational change but decreases the GTPase rate, which causes transient but substantial accumulation of a low-fluorescence G alpha(i1).GTP species. Isothermal titration calorimetric analysis of the binding of (G202A)G alpha(i1) and (K180P)G alpha(i1) to the GTPase-activating protein RGS4 indicates that the G202A mutation stabilizes the pretransition state-like conformation of G alpha(i1) that is mimicked by the complex of G alpha(i1) with GDP and magnesium fluoroaluminate, whereas the K180P mutation destabilizes this state. The crystal structures of (K180P)G alpha(i1) bound to a slowly hydrolyzable GTP analog, and the GDP.magnesium fluoroaluminate complex provide evidence that the Mg(2+) binding site is destabilized and that Switch I is torsionally restrained by the K180P mutation. The data are consistent with a catalytic mechanism for G alpha in which major conformational transitions in Switch I and Switch II are obligate events that precede the bond-breaking step in GTP hydrolysis. In (K180P)G alpha(i1), the two events are decoupled kinetically, whereas in the native protein they are concerted.

About this Structure

1SVK is a Single protein structure of sequence from Rattus norvegicus. Full crystallographic information is available from OCA.

Reference

Uncoupling conformational change from GTP hydrolysis in a heterotrimeric G protein alpha-subunit., Thomas CJ, Du X, Li P, Wang Y, Ross EM, Sprang SR, Proc Natl Acad Sci U S A. 2004 May 18;101(20):7560-5. Epub 2004 May 5. PMID:15128951 Page seeded by OCA on Sat May 3 09:11:16 2008

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