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| <StructureSection load='6rtj' size='340' side='right'caption='[[6rtj]], [[Resolution|resolution]] 2.00Å' scene=''> | | <StructureSection load='6rtj' size='340' side='right'caption='[[6rtj]], [[Resolution|resolution]] 2.00Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6rtj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Blood_fluke Blood fluke]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTJ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6RTJ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6rtj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Schistosoma_mansoni Schistosoma mansoni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RTJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RTJ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FXH:1-[(dimethylamino)methyl]naphthalen-2-ol'>FXH</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Smp_048430 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6183 Blood fluke])</td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=FXH:1-[(dimethylamino)methyl]naphthalen-2-ol'>FXH</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Thioredoxin-disulfide_reductase Thioredoxin-disulfide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.9 1.8.1.9] </span></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rtj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtj OCA], [https://pdbe.org/6rtj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rtj RCSB], [https://www.ebi.ac.uk/pdbsum/6rtj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtj ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6rtj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rtj OCA], [http://pdbe.org/6rtj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rtj RCSB], [http://www.ebi.ac.uk/pdbsum/6rtj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rtj ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A3Q0KFL1_SCHMA A0A3Q0KFL1_SCHMA] Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.[ARBA:ARBA00002549] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Blood fluke]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Thioredoxin-disulfide reductase]] | + | [[Category: Schistosoma mansoni]] |
- | [[Category: Angelucci, F]] | + | [[Category: Angelucci F]] |
- | [[Category: Fata, F]] | + | [[Category: Fata F]] |
- | [[Category: Silvestri, I]] | + | [[Category: Silvestri I]] |
- | [[Category: Williams, D L]] | + | [[Category: Williams DL]] |
- | [[Category: Fad/nad linked reductase]]
| + | |
- | [[Category: Flavoprotein]]
| + | |
- | [[Category: Fragment]]
| + | |
- | [[Category: Schistosomiasis]]
| + | |
- | [[Category: Secondary site]]
| + | |
- | [[Category: Time-resolved structural study]]
| + | |
| Structural highlights
6rtj is a 1 chain structure with sequence from Schistosoma mansoni. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
| Method: | X-ray diffraction, Resolution 2Å |
Ligands: | , , , , |
Resources: | FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT |
Function
A0A3Q0KFL1_SCHMA Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.[ARBA:ARBA00002549]
Publication Abstract from PubMed
Selective suicide inhibitors represent a seductively attractive approach for inactivation of therapeutically relevant enzymes since they are generally devoid of off-target toxicity in vivo. While most suicide inhibitors are converted to reactive species at enzyme active sites, theoretically bioactivation can also occur in ectopic (secondary) sites that have no known function. Here, we report an example of such an "ectopic suicide inhibition", an unprecedented bioactivation mechanism of a suicide inhibitor carried out by a non-catalytic site of thioredoxin glutathione reductase (TGR). TGR is a promising drug target to treat schistosomiasis, a devastating human parasitic disease. Utilizing hits selected from a high throughput screening campaign, time-resolved X-ray crystallography, molecular dynamics, mass spectrometry, molecular modeling, protein mutagenesis and functional studies, we find that 2-naphtholmethylamino derivatives bound to this novel ectopic site of Schistosoma mansoni (Sm)TGR are transformed to covalent modifiers and react with its mobile selenocysteine-containing C-terminal arm. In particular, one 2-naphtholmethylamino compound is able to specifically induce the pro-oxidant activity in the inhibited enzyme. Since some 2-naphtholmethylamino analogues show worm killing activity and the ectopic site is not conserved in human orthologues, a general approach to development of novel and selective anti-parasitic therapeutics against schistosoma is proposed.
Ectopic suicide inhibition of thioredoxin glutathione reductase.,Silvestri I, Lyu H, Fata F, Banta PR, Mattei B, Ippoliti R, Bellelli A, Pitari G, Ardini M, Petukhova V, Thatcher GRJ, Petukhov PA, Williams DL, Angelucci F Free Radic Biol Med. 2020 Feb 1;147:200-211. doi:, 10.1016/j.freeradbiomed.2019.12.019. Epub 2019 Dec 20. PMID:31870799[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Silvestri I, Lyu H, Fata F, Banta PR, Mattei B, Ippoliti R, Bellelli A, Pitari G, Ardini M, Petukhova V, Thatcher GRJ, Petukhov PA, Williams DL, Angelucci F. Ectopic suicide inhibition of thioredoxin glutathione reductase. Free Radic Biol Med. 2020 Feb 1;147:200-211. doi:, 10.1016/j.freeradbiomed.2019.12.019. Epub 2019 Dec 20. PMID:31870799 doi:http://dx.doi.org/10.1016/j.freeradbiomed.2019.12.019
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