1spv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1spv" [edit=sysop:move=sysop])
Current revision (07:25, 30 October 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1spv.png|left|200px]]
 
-
{{STRUCTURE_1spv| PDB=1spv | SCENE= }}
+
==Crystal Structure of the Putative Phosphatase of Escherichia coli, Northeast Structural Genomoics Target ER58==
-
 
+
<StructureSection load='1spv' size='340' side='right'caption='[[1spv]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal Structure of the Putative Phosphatase of Escherichia coli, Northeast Structural Genomoics Target ER58===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1spv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SPV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SPV FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[1spv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SPV OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1spv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1spv OCA], [https://pdbe.org/1spv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1spv RCSB], [https://www.ebi.ac.uk/pdbsum/1spv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1spv ProSAT], [https://www.topsan.org/Proteins/NESGC/1spv TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YMDB_ECOLI YMDB_ECOLI] Deacetylates O-acetyl-ADP ribose. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization/activation.<ref>PMID:19141481</ref> <ref>PMID:21257746</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sp/1spv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1spv ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Acton, T B.]]
+
[[Category: Large Structures]]
-
[[Category: Forouhar, F.]]
+
[[Category: Acton TB]]
-
[[Category: Hunt, J F.]]
+
[[Category: Forouhar F]]
-
[[Category: Lee, I.]]
+
[[Category: Hunt JF]]
-
[[Category: Montelione, G T.]]
+
[[Category: Lee I]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Montelione GT]]
-
[[Category: Tong, L.]]
+
[[Category: Tong L]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Vorobiev SM]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao R]]
-
[[Category: Alpha/beta monomeric protein]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structural genomoic]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal Structure of the Putative Phosphatase of Escherichia coli, Northeast Structural Genomoics Target ER58

PDB ID 1spv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1spv"
Personal tools