2o4d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:22, 30 October 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa==
==Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa==
-
<StructureSection load='2o4d' size='340' side='right' caption='[[2o4d]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
+
<StructureSection load='2o4d' size='340' side='right'caption='[[2o4d]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2o4d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O4D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2O4D FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2o4d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2O4D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2O4D FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA0269 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2o4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o4d OCA], [http://pdbe.org/2o4d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2o4d RCSB], [http://www.ebi.ac.uk/pdbsum/2o4d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2o4d ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2o4d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2o4d OCA], [https://pdbe.org/2o4d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2o4d RCSB], [https://www.ebi.ac.uk/pdbsum/2o4d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2o4d ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/Q9I6M1_PSEAE Q9I6M1_PSEAE]] Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity.[SAAS:SAAS00088543]
+
[https://www.uniprot.org/uniprot/Q9I6M1_PSEAE Q9I6M1_PSEAE] Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity.[SAAS:SAAS00088543]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o4/2o4d_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o4/2o4d_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Battaile, K]]
+
[[Category: Large Structures]]
-
[[Category: Chirgadze, N Y]]
+
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Edwards, A M]]
+
[[Category: Battaile K]]
-
[[Category: Kimber, M]]
+
[[Category: Chirgadze NY]]
-
[[Category: Kisselman, G]]
+
[[Category: Edwards AM]]
-
[[Category: McGrath, T E]]
+
[[Category: Kimber M]]
-
[[Category: Ng, I]]
+
[[Category: Kisselman G]]
-
[[Category: Pai, E F]]
+
[[Category: McGrath TE]]
-
[[Category: Romanov, V]]
+
[[Category: Ng I]]
-
[[Category: Virag, C]]
+
[[Category: Pai EF]]
-
[[Category: Wu-Brown, J]]
+
[[Category: Romanov V]]
-
[[Category: Hypothetical protein]]
+
[[Category: Virag C]]
-
[[Category: Unknown function]]
+
[[Category: Wu-Brown J]]

Current revision

Crystal Structure of a hypothetical protein from Pseudomonas aeruginosa

PDB ID 2o4d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2o4d"
Personal tools