2oka

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:24, 30 October 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2oka.png|left|200px]]
 
-
<!--
+
==Crystal structure of Q9HYQ7_PSEAE from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium target PaR82==
-
The line below this paragraph, containing "STRUCTURE_2oka", creates the "Structure Box" on the page.
+
<StructureSection load='2oka' size='340' side='right'caption='[[2oka]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2oka]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OKA FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oka FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oka OCA], [https://pdbe.org/2oka PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oka RCSB], [https://www.ebi.ac.uk/pdbsum/2oka PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oka ProSAT], [https://www.topsan.org/Proteins/NESGC/2oka TOPSAN]</span></td></tr>
-
{{STRUCTURE_2oka| PDB=2oka | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal structure of Q9HYQ7_PSEAE from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium target PaR82===
+
[https://www.uniprot.org/uniprot/Q9HYQ7_PSEAE Q9HYQ7_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2OKA is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKA OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ok/2oka_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oka ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Single protein]]
+
[[Category: Acton TB]]
-
[[Category: Acton, T B.]]
+
[[Category: Baran MC]]
-
[[Category: Baran, M C.]]
+
[[Category: Benach J]]
-
[[Category: Benach, J.]]
+
[[Category: Chen XC]]
-
[[Category: Chen, X C.]]
+
[[Category: Cunningham K]]
-
[[Category: Cunningham, K.]]
+
[[Category: Fang Y]]
-
[[Category: Fang, Y.]]
+
[[Category: Hunt JF]]
-
[[Category: Hunt, J F.]]
+
[[Category: Liu J]]
-
[[Category: Liu, J.]]
+
[[Category: Ma LC]]
-
[[Category: Ma, L C.]]
+
[[Category: Montelione GT]]
-
[[Category: Montelione, G T.]]
+
[[Category: Neely H]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Owens L]]
-
[[Category: Neely, H.]]
+
[[Category: Rost B]]
-
[[Category: Owens, L.]]
+
[[Category: Seetharaman J]]
-
[[Category: Rost, B.]]
+
[[Category: Tong L]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Xiao R]]
-
[[Category: Tong, L.]]
+
-
[[Category: Xiao, R.]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Par82]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:00:01 2008''
+

Current revision

Crystal structure of Q9HYQ7_PSEAE from Pseudomonas aeruginosa. Northeast Structural Genomics Consortium target PaR82

PDB ID 2oka

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2oka"
Personal tools