2r2a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:36, 30 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2r2a.jpg|left|200px]]<br /><applet load="2r2a" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2r2a, resolution 1.82&Aring;" />
 
-
'''Crystal structure of N-terminal domain of zonular occludens toxin from Neisseria meningitidis'''<br />
 
-
==About this Structure==
+
==Crystal structure of N-terminal domain of zonular occludens toxin from Neisseria meningitidis==
-
2R2A is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis_mc58 Neisseria meningitidis mc58] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R2A OCA].
+
<StructureSection load='2r2a' size='340' side='right'caption='[[2r2a]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
-
[[Category: Neisseria meningitidis mc58]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2r2a]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis_MC58 Neisseria meningitidis MC58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R2A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R2A FirstGlance]. <br>
-
[[Category: Clancy, S.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.82&#8491;</td></tr>
-
[[Category: Joachimiak, A.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r2a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r2a OCA], [https://pdbe.org/2r2a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r2a RCSB], [https://www.ebi.ac.uk/pdbsum/2r2a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r2a ProSAT], [https://www.topsan.org/Proteins/MCSG/2r2a TOPSAN]</span></td></tr>
-
[[Category: Osipiuk, J.]]
+
</table>
-
[[Category: Patterson, S.]]
+
== Function ==
-
[[Category: Wu, R.]]
+
[https://www.uniprot.org/uniprot/Q9JRY6_NEIMB Q9JRY6_NEIMB]
-
[[Category: SO4]]
+
== Evolutionary Conservation ==
-
[[Category: apc84050 2]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: mcsg]]
+
Check<jmol>
-
[[Category: midwest center for structural genomics]]
+
<jmolCheckbox>
-
[[Category: protein structure initiative]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r2/2r2a_consurf.spt"</scriptWhenChecked>
-
[[Category: psi-2]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: structural genomics]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: zonular occludens toxin]]
+
</jmolCheckbox>
-
 
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r2a ConSurf].
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:44:15 2008''
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Neisseria meningitidis MC58]]
 +
[[Category: Clancy S]]
 +
[[Category: Joachimiak A]]
 +
[[Category: Osipiuk J]]
 +
[[Category: Patterson S]]
 +
[[Category: Wu R]]

Current revision

Crystal structure of N-terminal domain of zonular occludens toxin from Neisseria meningitidis

PDB ID 2r2a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools