3l7v
From Proteopedia
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| - | {{STRUCTURE_3l7v| PDB=3l7v | SCENE= }} | ||
| - | ===Crystal structure of a hypothetical protein smu.1377c from Streptococcus mutans UA159=== | ||
| - | {{ABSTRACT_PUBMED_20606270}} | ||
| - | == | + | ==Crystal structure of a hypothetical protein smu.1377c from Streptococcus mutans UA159== |
| - | [[3l7v]] is a 1 chain structure with sequence from [ | + | <StructureSection load='3l7v' size='340' side='right'caption='[[3l7v]], [[Resolution|resolution]] 2.26Å' scene=''> |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[3l7v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_mutans_UA159 Streptococcus mutans UA159]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L7V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L7V FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.256Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l7v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l7v OCA], [https://pdbe.org/3l7v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l7v RCSB], [https://www.ebi.ac.uk/pdbsum/3l7v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l7v ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8DTG7_STRMU Q8DTG7_STRMU] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l7/3l7v_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3l7v ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Members of the Sua5_YciO_YrdC protein family are found in both eukaryotes and prokaryotes and possess a conserved alpha/beta twisted open-sheet fold. The Escherichia coli protein YrdC has been shown to be involved in modification of tRNA. The crystal structure of smu.1377c, a hypothetical protein from Streptococcus mutans, has been determined to 2.25 A resolution. From structure analysis and comparison, it is shown that smu.1377c is a member of the Sua5_YciO_YrdC family and that it may play the same role as E. coli YrdC. | ||
| - | + | The structure of the hypothetical protein smu.1377c from Streptococcus mutans suggests a role in tRNA modification.,Fu TM, Liu X, Li L, Su XD Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jul 1;66(Pt, 7):771-5. Epub 2010 Jun 23. PMID:20606270<ref>PMID:20606270</ref> | |
| - | <ref | + | |
| - | [[Category: Streptococcus mutans]] | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| - | [[Category: Fu | + | </div> |
| - | [[Category: Liu | + | <div class="pdbe-citations 3l7v" style="background-color:#fffaf0;"></div> |
| - | [[Category: Su | + | == References == |
| - | + | <references/> | |
| - | + | __TOC__ | |
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Streptococcus mutans UA159]] | ||
| + | [[Category: Fu T-M]] | ||
| + | [[Category: Liu X]] | ||
| + | [[Category: Su X-D]] | ||
Current revision
Crystal structure of a hypothetical protein smu.1377c from Streptococcus mutans UA159
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