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| ==Crystal structure of DalS, an ATP binding cassette transporter for D-alanine from Salmonella enterica== | | ==Crystal structure of DalS, an ATP binding cassette transporter for D-alanine from Salmonella enterica== |
- | <StructureSection load='4dz1' size='340' side='right' caption='[[4dz1]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='4dz1' size='340' side='right'caption='[[4dz1]], [[Resolution|resolution]] 1.90Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4dz1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_cholerae-suis"_smith_1894 "bacillus cholerae-suis" smith 1894]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZ1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DZ1 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4dz1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica Salmonella enterica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DZ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DZ1 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DAL:D-ALANINE'>DAL</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
- | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DAL:D-ALANINE'>DAL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LTSEBAI_2502 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28901 "Bacillus cholerae-suis" Smith 1894])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dz1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dz1 OCA], [https://pdbe.org/4dz1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dz1 RCSB], [https://www.ebi.ac.uk/pdbsum/4dz1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dz1 ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dz1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dz1 OCA], [http://pdbe.org/4dz1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dz1 RCSB], [http://www.ebi.ac.uk/pdbsum/4dz1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dz1 ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bacillus cholerae-suis smith 1894]] | + | [[Category: Large Structures]] |
- | [[Category: Junop, M]] | + | [[Category: Salmonella enterica]] |
- | [[Category: Mok, M]] | + | [[Category: Junop M]] |
- | [[Category: D-alanine binding]] | + | [[Category: Mok M]] |
- | [[Category: Periplasmic]]
| + | |
- | [[Category: Transport protein]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Expansion into new host niches requires bacterial pathogens to adapt to changes in nutrient availability and to evade an arsenal of host defences. Horizontal acquisition of Salmonella Pathogenicity Island (SPI) - 2 permitted the expansion of Salmonella enterica serovar Typhimurium into the intracellular environment of host cells by allowing it to deliver bacterial effector proteins across the phagosome membrane. This is facilitated by the SsrA-SsrB two-component regulatory system and a type III secretion system encoded within SPI-2. SPI-2 acquisition was followed by evolution of existing regulatory DNA, creating an expanded SsrB regulon involved in intracellular fitness and host infection. Here, we identified an SsrB-regulated operon comprising an ABC transporter in Salmonella. Biochemical and structural studies determined that the periplasmic solute-binding component, STM1633/DalS, transports D-alanine and that DalS is required for intracellular survival of the bacteria and for fitness in an animal host. This work exemplifies the role of nutrient exchange at the host-pathogen interface as a critical determinant of disease outcome.
Characterization of DalS, an ATP-binding cassette transporter for D-alanine, and its role in pathogenesis in Salmonella enterica.,Osborne SE, Tuinema BR, Mok MC, Lau PS, Bui NK, Tomljenovic-Berube AM, Vollmer W, Zhang K, Junop M, Coombes BK J Biol Chem. 2012 Mar 14. PMID:22418438[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Osborne SE, Tuinema BR, Mok MC, Lau PS, Bui NK, Tomljenovic-Berube AM, Vollmer W, Zhang K, Junop M, Coombes BK. Characterization of DalS, an ATP-binding cassette transporter for D-alanine, and its role in pathogenesis in Salmonella enterica. J Biol Chem. 2012 Mar 14. PMID:22418438 doi:10.1074/jbc.M112.348227
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