Antibody 3D structures

From Proteopedia

Revision as of 11:12, 5 November 2024

Humanized mouse antibody (hmFab) is a modified mFab which resembles more hFab.
Broadly neutralizing Fab and Neutralizing Fab are anti-HIV Fab.
Lama antibodies or nanobodies or camelid or VHH are natural single-domain antibodies containing just the heavy chain.
scFv is a single chain variable fragment in a fusion protein of the variable regions of the heavy and light chains of immunoglobulin.

3D structures of Antibody

Updated on 05-November-2024 {{#tree:id=OrganizedByTopic|openlevels=0|

• Fab

• • 8kad - hFab light chain - human
    
  • 7fab, 1mco, 3na9, 3lrs, 3mme, 3hi5, 1vge, 3nfs, 1ad0, 3w9d, 4nm4, 8fab, 1opg, 4fnl, 4fqh, 6n32, 1aqk, 2hff, 2agj, 3hc0, 3g6a, 3dgg, 3dif, 1b2w, 3eyo, 3eyq, 2aj3, 3fzu, 3aaz, 3gje, 5fhb, 5fha, 5f6i, 5f6h, 5drw, 5d6c, 4py7, 4ptt, 4ob5, 5szf, 5chn, 4lkc, 4hie, 4gxv, 6be2, 6be4, 6cbj, 6dcv, 6dwc, 6foe, 6ghg, 6hkg, 6ias, 6nuy, 6nuz, 6nv0, 6obz, 6pzg, 6pzh, 6q19, 6q1a, 6q1e, 6q1g, 6q1j, 6q1k, 6qbc, 6qcu, 6u85, 6u9u, 6vi2, 6vrq, 6v4r, 6vpy, 6vtu, 6w5a, 6w5d, 6wiy, 6wj0, 6wla, 6xrj, 6z3k, 7aj6, 7arn, 7jkb, 7jz1, 7jz4, 7ke1, 7kfg, 7kgu, 7kx4, 7lud, 7lyv, 7lyw, 7m1c, 7mf7, 7mf8, 7mf9, 7mfa, 7n04, 7n07, 7oo2, 7ps3, 7qxc, 7qxd, 7qxe, 7re9, 7sen, 7tus, 7u04, 7u0k, 7uel, 7uem, 7uen, 7vsu, 7vsw, 7y0g, 8c67, 8vfu, 8vtp, 8vtr, 8vu1, 8vu4, 8vua, 8vuc - hFab
    
  • 3naa, 3nab, 3nac, 3ncj, 3o2v, 3hc3, 3hc4, 6uum, 6y1k, 6y1l, 6y1m, 6y1n, 7mfb, 7s8g - hFab (mutant)
    
  • 8d01 - rmFab – rhesus monkey
    
  • 3i75, 1f4w, 1aif, 1ghf, 2z91, 1ind, 3bkc, 3bkm, 1iy0, 3pp3, 3pp4, 3okm, 2hkh, 1ay1, 1nbv, 1qbm, 1bbd, 1dsf, 1gpo, 1mnu, 1igf, 1for, 1k6q, 1bz7, 1dqd, 2ipt, 2iq9, 2iqa, 2w60, 2w9d, 3iu4, 1q9k, 1q9l, 1q9o, 2z4q, 1cl7, 1cr9, 1r24, 1gig, 1uyw, 1cgs, 2cgr, 1q0x, 1ibg, 3eo0, 2op4, 2q76, 2ojz, 2g60, 2dbl, 1dbj, 1dbk, 1dbm, 1dba, 1mrc, 2gcy, 1flr, 1uz6, 1rfd, 1t2q, 1ggb, 1ggc, 1bm3, 2eh7, 2fat, 3cfc, 1fl3, 3cfe, 4j1u, 4gq9, 3qg7, 3rvt, 3s62, 4gay, 5mx3, 5l88, 5i66, 5cma, 5az2, 4z0b, 4qth, 5vzr, 5lgh, 5l9d, 5l7x, 4lci, 4k23, 6hgu, 6ks2, 6p79, 6qnk, 6shg, 6ug7, 6ug8, 6uga, 6ugd, 6vl8, 6vl9, 6w4v, 6x5e, 6xuk, 6z7x, 7bg1, 7c95, 7f2s, 7fgk, 7nx2, 7sd2, 7t0f, 7t0g, 7t0h, 7t0k, 7t0i, 7t0j, 7te4, 7tuh, 7v3q, 8bjz, 8bso, 9gp2 - mFab – mouse
    
  • 3eot, 2d03, 3esv, 3et9 – mFab (mutant)
    
  • 3iy2, 3iy3, 3iy4, 3iy5, 3iy6, 3iy7 - mFab – Cryo EM
    
  • 1jpt, 3mxv, 2o5x, 1ucb, 1bbj, 1t04, 2fgw, 1fvd, 1fve, 4kuz, 6l8t, 6w4w, 9b74, 9b75, 9b76 - hmFab
    
  • 1cqk – mFab MAK33 CH3 domain
    
  • 3mj8, 3r06 – AhFab – Armenian hamster
    
  • 3iy1, 1zan – raFab – rat
    
  • 4k3e, 4k3d, 6oo0, 6qn7, 6qn8, 6qn9, 6qna, 8bs8 – bFab – bovine
    
  • 4b41, 4m3j, 7bnp, 7bnw, 7np9, 7phs – LgFab – Lama glama
    
  • 6cjk, 7d9z, 8jow – rFab - rabbit
    

• Synthetic Fab

• • 7mjj, 7mjk - syFab + SARS-CoV-2 spike protein – Cryo EM
    
  • 7kkj – syVHH anti-SARS
    
  • 7c8v, 7c8w, 7can, 7d2z, 7d30, 7kgj, 7kgk, 7klw, 7mfu – syVHH + SARS-CoV-2 spike protein
    
  • 7a25, 7a29, 7kkk, 7kkl, 7mjl, 7n0g, 7mjh, 7n0h – syVHH + SARS-CoV-2 spike protein – Cryo EM
    
  • 6j6y – syFab + FGFR4
    
  • 8slb – syFab + CORA
    
  • 6b9j – syFab + vaccinia virus protein
    
  • 6otc – syFab + Marburg virus protein
    
  • 6svl – syFab + MYDGF
    
  • 6vi1 – syFab + terminase
    
  • 6iap – syFab + Nkp46
    
  • 8vra – syFab + MHC + Kras peptide
    
  • 8jnk, 8jnr – syFab + ALKB + DNA
    
  • 8djg – syFab + adhesion G protein-coupled receptor
    
  • 7mdj - syFab + KcsA K+ channel + ion
    
  • 7keo – syFab igG1 + ubiquitin
    
  • 6wzn – syscFv
    
  • 8xjl – syscFv + Gi + prostaglandin receptor – Cryo EM
    
  • 8ykw, 8ykx – syscFv + Gi + succinate receptor – Cryo EM
    
  • 8j19, 8j1a, 8wrb – syscFv + Gi + G protein coupled receptor – Cryo EM
    
  • 8xjo – syscFv + Gi + thromboxane receptor – Cryo EM
    
  • 8the – syscFv + TonB-dependent transporter + heme – Cryo EM
    
  • 6t2j, 7mfv – syVHH
    
  • 7v0v – syVHH anti-GFP - NMR
    
  • 6sc5, 6sc6, 6sc7, 6sc8, 6sc9 – syVHH + RNF31
    
  • 7cz0 – syVHH + TGP
    
  • 6do1 – syVHH + BRIL + S1I8 peptide
    

• Anti-HIV Fab or broadly neutralizing Fab

• • 1rz7, 1rz8, 1rzf, 1rzg, 1rzi, 3mlj, 3mug, 3qeh, 3ttn, rpi, 3tnm, 4fz8, 4f58, 4f57, 4f5a, 5iie, 5dt1, 5cey, 5cex, 5cck, 5bzw, 5bzd, 4rqq, 5uy3, 4qf1, 6avn, 6b3d, 6bla, 6cxl, 6mtr, 6mts, 6o3d, 6o3k, 6uul, 6vu2, 6wor, 6wos, 7l77, 7l79, 7rdj, 7rdk, 7rdl, 7rdm, 7u0b, 7u0c, 7uce, 8gc1, 8gbv, 8gbw, 8gbx, 8gby, 8gbz, 8gc0, 8gpk - hFab
    
  • 3nz8, 3o6k, 3ntc, 3qeg, 8d54 – mFab
    
  • 5kg9 – hmFab
    
  • 5dd6, 5dd5, 5dd3, 5dd1, 4rfe, 4q2z, 5t4z, 6u3z, 6u6m, 6u6o, 6vor, 6vsr, 7ryu, 7ryv – rmFab – rhesus macaque
    
  • 7l6m – rmFab – Cryo EM
    
  • 7ra7 – rFab
    
  • 3juy, 4ut7 – hVHH anti-HIV
    
  • 3r0m – LgVHH anti-HIV
    
  • 2xxc – ViVHH anti-HIV - vicugna
    

• Anti-SARS-CoV-2 Fab

• • 6nb8, 6w7y, 6xca, 7dpm, 7jmx, 7k8n, 7k8o, 7k8p, 7k8q, 7k8r, 7kn3, 7kza, 7kzc, 7lk9, 7lka, 7n3e, 7n3f, 7n3g, 7n3h, 7sn1, 7vmz, 7wpv, 7zf6, 7zff - hFab anti-SARS-CoV-2
    
  • 6c6z, 4xak, 6w41, 6xc2, 6xc3, 6xc4, 6xc7, 6xkp, 6xkq, 6yla, 6zer, 6zlr, 7b3o, 7beh, 7bei, 7bej, 7bek, 7bel, 7bem, 7ben, 7beo, 7bep, 7bnv, 7bwj, 7bz5, 7c01, 7cah, 7cdi, 7cdj, 7ch4, 7ch5, 7chb, 7chc, 7che, 7chf, 7cho, 7chp, 7chs, 7cjf, 7cm4, 7djz, 7dk0, 7dk2, 7e3o, 7e5o, 7e5y, 7e7x, 7e7y, 7e86, 7e88, 7e8m, 7ejy, 7ejz, 7f6y, 7f7e, 7f7h, 7fcp, 7fcq, 7fjc, 7jjs, 7jmo, 7jmp, 7jmw, 7jn5, 7jx3, 7k8m, 7k9z, 7kfv, 7kfw, 7kfx, 7kfy, 7klg, 7klh, 7kmg, 7kmh, 7kmi, 7kn4, 7kzb, 7l0n, 7l2c, 7l5b, 7l7d, 7l7e, 7lm8, 7lm9, 7lop, 7lq7, 7ly3, 7m3i, 7m6d, 7mf1, 7mmo, 7msq, 7mzf, 7mzg, 7mzh, 7mzi, 7mzj, 7mzk, 7mzl, 7mzm, 7mzn, 7n3i, 7neg, 7neh, 7np1, 7nx6, 7nx7, 7nx8, 7nx9, 7nxa, 7nxb, 7or9, 7ora, 7orb, 7pry, 7prz, 7pqy, 7pqz, 7pr0, 7ps0, 7ps1, 7ps2, 7ps4, 7ps5, 7ps6, 7ps7, 7q0g, 7q0h, 7q0i, 7qez, 7qf0, 7qf1, 7qnw, 7qnx, 7qny, 7r6w, 7r6x, 7r8l, 7rku, 7rnj, 7s0b, 7s4s, 7s5p, 7s5q, 7s5r, 7sd5, 7si2, 7t7b, 7tcq, 7te1, 7tf1, 7tf4, 7tn0, 7tow, 7ttm, 7ttx, 7tty, 7u2d, 7u2e, 7u8e, 7urq, 7urs, 7vyr, 7wbz, 7wph, 7x63, 7x66, 7x7o, 7x9e, 7xik, 7xil, 7y3n, 7zf3, 7zf4, 7zf5, 7zf8, 7zf9, 7zfa, 7zfc, 7zfd, 7zfe, 8d36, 8d6z, 8dao, 8dcc, 8dgu, 8dgw, 8dxu, 8f0i, 8f2j, 8f2x, 8fah, 8gb7, 8qh0, 8qh1, 8sdh, 8sir, 8sis, 8sit, 8smi, 8smt - hFab + SARS-CoV-2 spike protein
    
  • 6nb6, 6nb7, 6wps, 6wpt, 6xcm, 6xcn, 6xdg, 6xey, 6yor, 6zdh, 6zdg, 6zfo, 7a5r, 7a5s, 7akd, 7akj, 7byr, 7bwj, 7c2l, 7cac, 7cai, 7cak, 7chh, 7cwl, 7cwm, 7cwn, 7cwo, 7cws, 7cwu, 7cyh, 7cyp, 7czq, 7czr, 7czs, 7czt, 7czu, 7czv, 7czw, 7czp, 7czx, 7d00, 7d03, 7d0b, 7d0c, 7d0d, 7d4g, 7dx4, 7dzx, 7dzy, 7e23, 7e39, 7e3b, 7e3c, 7e3k, 7e3l, 7e5r, 7e5s, 7e8c, 7e8f, 7e9n, 7e9o, 7e9p, 7e9q, 7eh5, 7ej4, 7ej5, 7ek0, 7enf, 7eng, 7epx, 7ey0, 7ey4, 7ey5, 7eya, 7ezv, 7f46, 7f62, 7f63, 7f6z, 7fae, 7faf, 7fjn, 7fjo, 7jv2, 7jv4, 7jv6, 7jva, 7jvc, 7jw0, 7k43, 7k45, 7k4n, 7k8s, 7k8t, 7k8u, 7k8v, 7k8w, 7k8x, 7k8y, 7k8x, 7k8y, 7k8z, 7k90, 7kmk, 7kml, 7kqb, 7kqe, 7ks9, 7kxj, 7kxk, 7l02, 7l06, 7l09, 7l2d, 7l2e, 7l2f, 7l3n, 7l56, 7l57, 7l58, 7laa, 7lab, 7ld1, 7lcn, 7ljr, 7lm8, 7lqv, 7lqw, 7lrs, 7lrt, 7ls9, 7lss, 7lxw, 7lxx, 7lxy, 7lxz, 7ly0, 7ly2, 7m42, 7m6e, 7m6f, 7m6g, 7m6h, 7m6i, 7m71, 7m7b, 7m8j, 7m8k, 7mkm, 7mlz, 7mm0, 7mw2, 7mw3, 7mw4, 7mw5, 7mw6, 7mxp, 7n5h, 7n62, 7n64, 7n8h, 7n8i, 7nd3, 7nd4, 7nd5, 7nd6, 7nd7, 7nd8, 7nd9, 7nda, 7ndb, 7ndc, 7ndd, 7ntc, 7p40, 7pnm, 7pnq, 7po5, 7q0a, 7q6f, 7q9g, 7q9i, 7q9j, 7q9k, 7q9m, 7q9p, 7r40, 7r7n, 7r8m, 7r8n, 7r8o, 7ra8, 7ral, 7rb7, 7rbu, 7rkv, 7rq6, 7rr0, 7rw2, 7s0c, 7s0d, 7s0e, 7s6j, 7sc1, 7sg4, 7sj0, 7sn2, 7sn3, 7so9, 7soa, 7sob, 7soc, 7sod, 7soe, 7sof, 7swn, 7swo, 7swp, 7t01, 7tas, 7tat, 7tb8, 7tbf, 7tc9, 7tca, 7tcc, 7the, 7tht, 7tly, 7tlz, 7tm0, 7u0d, 7uap, 7uaq, 7uar, 7ukl, 7upw, 7upx, 7upy, 7v23, 7v24, 7v26, 7v2a, 7v3l, 7we7, 7we8, 7we9, 7wea, 7web, 7wec, 7wed, 7wee, 7wef, 7whz, 7wi0, 7wjy, 7wjz, 7wk0, 7wk8, 7wlc, 7wly, 7wlz, 7wm0, 7wo4, 7wo5, 7wo7, 7woa, 7wob, 7woc, 7wog, 7won, 7wp0, 7wp1, 7wp2, 7wp5, 7wr8, 7wrl, 7wro, 7wrz, 7ws0, 7ws1, 7ws2, 7ws3, 7ws4, 7ws5, 7ws6, 7ws7, 7ws8, 7ws9, 7wuh, 7wwl, 7wwm, 7x08, 7x26, 7x6a, 7x96, 7xco, 7xck, 7xh8, 7xic, 7yad, 7zbu, 7zr7, 7zr8, 7zr9, 7zrc, 8c0y, 8c2r, 8csj, 8dad, 8dlr, 8dls, 8dlt, 8dlw, 8dlx, 8dt3, 8dtk, 8eqf, 8erq, 8f0h, 8hed, 8kdm, 8kdr, 8kds, 8kdt, 8kej, 8kek, 8keo, 8kep, 8keq, 8ker, 8xbf - hFab + SARS-CoV-2 spike protein – Cryo EM
    
  • 8dw2, 8dw3 - hFab + SARS-CoV-2 spike protein + darpin – Cryo EM
    
  • 7x2k, 8elq - hFab + nanobody + SARS-CoV-2 spike protein
    
  • 8elp - hFab + nanobody + SARS-CoV-2 spike protein – Cryo EM
    
  • 7sjs - hFab + SARS-CoV-2 spike protein peptide
    
  • 6yz7, 6z2m, 6zcz, 6zh9, 7fg2, 7fg3, 7kn6, 7kn7, 7raq, 7zfb, 7zxu, 8cwv - hFab + ViVHH + SARS-CoV-2 spike protein
    
  • 7xod, 8cwv - hFab + ViVHH + SARS-CoV-2 spike protein<br
  • 7n3c, 7n3d, 7str, 7sts, 7sue - hFab + SARS nucleoprotein
    
  • 7xcp - hFab + SARS-CoV-2 spike protein + ACE2 – Cryo EM
    
  • 8dfs - hFab + SARS-CoV-2 spike protein + ACE2
    
  • 7xnf, 8cwj - hFab + pangolin SARS-CoV-2 spike protein
    
  • 7vnc, 7vnd, 7vne, 7whi, 7whj, 7whk - hVHH + SARS-CoV-2 spike protein – Cryo EM
    
  • 8q7s - hVHH + SARS-CoV-2 spike protein
    
  • 7wpd, 7wpe, 7wpf - mrFab + ViVHH + SARS-CoV-2 spike protein – Cryo EM
    
  • 7tp3, 7tp4, 7wue - mrFab + SARS-CoV-2 spike protein
    
  • 7k9h, 7k9i, 7k9j, 7k9k, 7mkl, 7wk6, 7wka, 7wrv, 7x7t, 7x7u, 7x7v - mFab + SARS-CoV-2 spike protein – Cryo EM
    
  • 7f0x, 7f12, 7f15, 7s3n, 8gb8 - mFab + SARS-CoV-2 spike protein
    
  • 7m53 - mFab + SARS-CoV-2 spike protein peptide
    
  • 7my2, 7my3 – mVHH anti-SARS + SARS-CoV-2 spike protein
    
  • 6waq, 6z43, 8cwu – LgVHH anti-SARS + spike protein
    
  • 7on5 – ViVHH anti-SARS
    
  • 7f5g, 7f5h, 7kn5, 7ldj, 7olz – ViVHH anti-SARS + spike protein
    
  • 6zxn – ViVHH anti-SARS + spike protein – Cryo EM
    
  • 7cyv, 7deo, 7det, 7deu, 7vmu, 8dce, 8wfh – hscFv + SARS spike protein
    
  • 7t3m - EcscFv + SARS-CoV spike protein – Cryo EM
    
  • 7b14, 7b17, 7b18, 7jvb - LgVHH + SARS spike glycoprotein
    
  • 7ksg - LgVHH + SARS spike glycoprotein – Cryo EM
    
  • 7r98- LgVHH + SARS nucleoprotein – Cryo EM
    

• Anti-MERS-CoV Fab

• • 6nb5 - hFab anti-MERS-CoV
    
  • 6pxg - mFab anti-MERS-CoV
    
  • 7coe, 8dgx - hFab + MERS-CoV spike protein
    
  • 6nb3, 6nb4, 7v5k, 7v6n - hFab + MERS-CoV spike protein – Cryo EM
    
  • 8dgv - hFab + MERS-CoV spike peptide
    
  • 6pxh, 6pz8, 7s3m - mFab anti-MERS-CoV + MERS-CoV protein
    
  • 6j11 - mscFv + MERS-CoV spike protein
    
  • 6war - LgVHH + MERS-CoV spike protein
    

• Anti-hepatitis Fab

• • 6mwn – hFab + hepatitis A virus RNA
    
  • 4hs8, 5kzp, 7lki – hFab + hepatitis C virus peptide
    
  • 6bkb, 6bkc, 6bkd, 6mej, 6meh, 6mei, 6mek, 6u8d, 6u8k, 6uyf, 6urh, 6uyd, 6uyg, 6uym, 6wo3, 6wo4, 6woq, 8w0v, 8w0w, 8w0x, 8w0y - hFab anti-hepatitis C virus + glycoprotein
    
  • 8txq - hFab anti-hepatitis C virus + glycoprotein – Cryo EM
    
  • 7kql - hFab anti-hepatitis C virus + Hepatitis A cellular receptor
    
  • 7jtf, 7jtg - rmFab + hepatitis C envelope protein
    
  • 4why, 4wht - raFab + hepatitis C peptide
    
  • 5npi, 5npj – mscFv + hepatitis C peptide
    
  • 6jhq, 6jhr, 6jhs, 6jht - mFab + hepatitis A proteins – Cryo EM
    
  • 6cwt – rFab + Hepatitis B capsid
    
  • 6cwd – rscFv + hepatitis B capsid
    
  • 5nph, 6bzu, 6bzv, 6bzw, 6bzy – mFab + hepatitis C virus peptide
    

• Human Fab: small molecule complex

• • 3o2w - hFab 1e9 (mutant) + transition state analog
    
  • 3oau – hFab 2g12 (mutant) + mannose
    
  • 4ptu, 4hih – hFab + rhamnose
    
  • 1ikf – hFab R45 + cyclosporin
    
  • 3oay, 3oaz, 3ob0, 6msy, 6mub, 6mu3, 6mnf - hFab 2g12 + glycan
    
  • 6n35, 6n2x, 5i8o - hFab + polysaccharide
    
  • 7dc7 - hFab + ATP
    
  • 6bjz - hFab + fluorescent amino acid
    
  • 7kkh - hFab + piperazine derivative
    
  • 8tfp - hFab + carfentanil
    

• Mouse Fab: small molecule complex

• • 3ra7 – mFab + digoxigenin
    
  • 3okd, 3oke, 3okk, 3okl, 3okn, 3oko, 3hzk, 3hzm, 3hzv, 3hzy, 3pho, 3phq, 3hns, 3hnt, 3hnv - mFab + liposaccharide
    
  • 1ine, 1ub5, 1ub6 - mFab + hapten
    
  • 3ls4 – mFab + tetrahydrocannabinol
    
  • 1mfc, 1mfd, 1mfe, 4hgw – mFab + polysaccharide
    
  • 2ntf - mFab RS2-1G9 + lactone analog
    
  • 1riu, 1riv, 1qyg, 1q72 - mFab + cocaine derivative
    
  • 1ynk, 1ynl, 1etz – mFab + sweetener
    
  • 1yef – mFab D2.3 + substrate analog
    
  • 1yeg - mFab D2.3 + product
    
  • 1p7k – mFab + HEPES
    
  • 1q0y – mFab 9B1 + morphine
    
  • 3sy0, 3t65, 3t77, 3t4y, 1q9w, 1f4x, 1f4y, 1mfa, 1mfb - mFab + carbohydrate
    
  • 1mex – mFab 29G12 + benzoic acid derivative
    
  • 1mrd, 1mre, 1mrf – mFab JEL103 + nucleotide
    
  • 1dbb – mFab DB3 + progesterone
    
  • 1igj - mFab 26-10 + digoxin
    
  • 4fab – mFab 4-4-20 + fluorescin
    
  • 7f35 – mFab + gatifloxacin
    
  • 1dl7 - mFab MCPC603 + phosphocholine
    
  • 3cfb, 3cfd, 2g2r – mFab + stilbene hapten
    
  • 4kze, 4kzd, 7szu, 7u0y – mFab + RNA
    
  • 7qt3, 7qt4 - mFab + fentanyl
    

• Other Fab: small molecule complex

• • 2jb5, 2jb6 - hmFab + hapten
    
  • 3eyv - hmFab 13G5 (mutant) + hapten
    

• Mouse Fab: peptide complex

• • 3e8u - mFab + BNP peptide
    
  • 2a6d, 2a6i, 2a6j, 2a6k, 8ds7 - mFab + peptide
    
  • 3hr5 – mFab + M1prime peptide
    
  • 3eys, 3eyu - mFab + amyloid-β-related peptide
    
  • 3ggw – mFab + carbohydrate-mimetic peptide
    
  • 3cxd, 3dsf, 5x5x – mFab + osteopontin peptide
    
  • 2zpk – mFab + proteinase-activated receptor peptide
    
  • 3ifl, 3ifn, 3ifo, 3ifp, 7e6p - mFab + amyloid peptide
    
  • 2eh8 - mFab + PRES1 peptide
    
  • 2brr – mFab + outer membrane protein peptide
    
  • 1xgy, 7doh – mFab + rhodopsin peptide
    
  • 1pz5 – mFab SYA/J6 + peptide
    
  • 1a3r – mFab + rhinovirus capsid peptide
    
  • 1cu4 - mFab + prion protein peptide
    
  • 1fpt – mFab + poliovirus peptide
    
  • 1mvu – mFab + glycoprotein
    
  • 2ap2 – mFab + glycoprotein peptide + C-myc peptide
    
  • 1frg, 1him, 1hin, 1ifh - mFab + hemagglutinin peptide
    
  • 1tet – mFab + cholera toxin peptide
    
  • 5epm – mFab + therapotoxin peptide
    
  • 1i8i, 1i8k – mFab + EGFR peptide
    
  • 4gag, 4gaj – mFab + genome polyprotein peptide
    
  • 5mv4, 5mu0 – mFab + collagen peptide
    
  • 6f7t – mFab + RNase peptide
    
  • 7njz, 7nw3 – mFab + chemokine receptor peptide
    
  • 7v4w, 7v64, 7v7k, 7v8q, 7vac, 7vaz – mFab + mucin peptide
    
  • 7o2z, 7o30, 7o31, 7o33 – mFab + PAS peptide
    
  • 7fgj, 7fgl, 7fgr - mFab + Tau peptide
    
  • 8fas - mFab + NANP5 peptide
    

• Human Fab: peptide complex

• • 3h0t - hFab + hepcidin peptide
    
  • 1sm3 - hFab SM3 + peptide
    
  • 5ea0 - hFab 7968 + complement factor peptide
    
  • 4z0x, 4xvj - hFab + HCV E2 peptide
    
  • 3eyf, 4hha – hFab + cytomegalovirus peptide
    
  • 2hfg, 2h9g, 8qya – hFab + TNF receptor peptide
    
  • 3csy, 6n7j, 7rpu - hFab + Ebola envelope glycoprotein peptide
    
  • 6h06, 6h0e, 6gk7, 6gk8, 5zia, 5zv3, 6dcw, 7eyc, 7kqk - hFab + Tau peptide
    
  • 6bqb, 6ct7, 6kva, 6kvf, 6ldv, 6ldw, 6ldx, 7bxv, 7c94, 7y3j – hFab + peptide
    
  • 6e4y, 6e4z, 6mv5 - hFab + PCSK9 peptide
    
  • 7jwq - hFab + IL-1b peptide
    
  • 7jwp - hFab + IL-18 peptide
    
  • 7sfx - hFab + CD99 peptide
    
  • 7um3 - hFab + LAG3 peptide
    
  • 7rta - hFab + roropeptide Y
    
  • 7k7r - hFab + EBNA1 peptide
    
  • 7rt9 - hFab + YY peptide
    
  • 7s4g - hFab + Ly6G6D peptide
    
  • 7ow1, 7oxn - hFab + amyloid peptide
    
  • 7t86 - hFab + phospho-SD peptide
    

• Other Fab: peptide complex

• • 2hh0 – hmFab + prion protein peptide
    
  • 3bky – hmFab + CD20 peptide
    
  • 5dmg – rFab + microtubule-associated protein peptide
    
  • 6ldy, 6x1s, 6x1t, 6x1u, 6x1v, 6x1w – rFab + peptide
    
  • 5dd0 – rmFab + peptide
    

• Anti-HIV Fab: peptide complex

• • 3egs, 3drt, 3drq, 3dro, 2fx7, 2fx8, 2fx9, 2cmr, 1tzg, 1tjg, 3mnw, 3moa, 3mob, 3mod, 1tjh, 1tji, 1u8h, 1u8i, 1u8j, 1u8k, 1u8l, 1u8m, 1u8n, 1u8o, 1u8p, 1u8q, 1u91, 1u92, 1u93, 1u95, 2f5b, 3go1, 5drz, 6o42 - hFab anti-HIV + gp41 peptide
    
  • 3ghb, 3ghe, 3c2a - hFab anti-HIV + envelope glycoprotein peptide
    
  • 3fn0, 2oqj, 6fy0, 6fy3, 6mtp, 6mtt, 6ncp, 6o3j, 8eli - hFab anti-HIV + peptide
    
  • 2b0s, 2b1a, 2b1h, 3se8, 3se9, 4jkp, 4jpv, 4jb9, 6vbo, 6vbp, 6vbq - hFab anti-HIV + glycoprotein gp120 peptide
    
  • 1nak, 2f58, 3f58, 1f58, 1acy, 1qnz - mFab anti-HIV + glycoprotein gp120 peptide
    
  • 1ai1, 1ggi – mFab anti-HIV + V3 peptide
    
  • 3o6l, 3o6m - mFab 11H6H1 anti-HIV + Tat peptide
    
  • 1jp5, 1svz - mFab anti-HIV + HIV-2 protease peptide
    
  • 6p8d, 6p8n, 6pdr, 6pdu, 6ubi, 6uce, 6ucf, 6wwc, 6wx2 – mFab + HIV-1 fusion peptide
    
  • 6mqc, 6mqe, 6mqm, 6mqr, 6mqs, 6n16, 6pds, 6pec, 6pef - rmFab + HIV fusion peptide
    
  • 6mnq, 6mnr, 6mns - rmFab anti-HIV + gp120 peptide
    
  • 6p60, 6p7h - Fab + HIV fusion peptide - platytthini
    

• Human Fab: protein complex

• • 3pnw – hFab + Tudor domain-containing protein 3
    
  • 3h42 - hFab LDLR + proprotein convertase subtilisin/kexin
    
  • 3nh7 – hFab ABD1556 + bone morphogenetic protein receptor
    
  • 3hi6 – hFab + integrin
    
  • 6avq, 6avr, 6avu, 7usl – hFab + integrin – Cryo EM
    
  • 2vxs, 5fhx - hFab + interleukin
    
  • 3b2u, 3b2v – hFab IMC-11F8 + EGFR
    
  • 2r0k, 2r0l – hFab + HGFA
    
  • 3be1, 3n85, 1n8z, 6att - hFab + ERBB-2
    
  • 7d85 - hFab + ERB-3
    
  • 3kr3 – hFab + IGF-II
    
  • 7o52 – hFab + CD22
    
  • 6yio, 7f9w – hFab + CD25
    
  • 7sgm – hFab + CD40
    
  • 7myz – hFab + CD47
    
  • 7chy, 7chz - hFab + IL-1b
    
  • 6oel – hFab + IL-4R
    
  • 7dc8 – hFab + IL-6R
    
  • 7rew – hFab + IL-13R
    
  • 6plh – hFab + IL-21R
    
  • 6u6u – hFab + IL-36R
    
  • 8sve - hFab + IL-10
    
  • 6ppg, 6wio - hFab + IL-17
    
  • 7wkx – hFab + IL-17A
    
  • 6hga, 6ppg – hFab + IL-17R
    
  • 3g6d – hFab CNTO607 + IL-13
    
  • 3g6j, 7ue9 – hFab + complement C3
    
  • 2wub, 3k2u – hFab 40 + hepatocyte growth factor activator
    
  • 6iz9 – hFab + hepatocyte growth factor
    
  • 6i04 – hFab + hepatocyte growth factor receptor
    
  • 6ktr - hFab + fibroblast growth factor
    
  • 3grw - hFab + fibroblast growth factor receptor
    
  • 3bdy, 2qr0, 2fjg, 2fjh, 1cz8, 5fv2, 5fv1, 6t9d, 7kez, 7kf0, 7kf1 – hFab + VEGF
    
  • 1adq – hFab IGM + igG1 Fc
    
  • 6eyo, 7si0 – hFab + igE
    
  • 8tfr – hFab + igG
    
  • 3dvg, 3dvn – hFab igG1 + ubiquitin
    
  • 3bn9, 7sjn, 7sjo – hFab E2 + serine protease
    
  • 2jix – hFab ABT-007 + erythropoietin receptor
    
  • 1za3, 6t3j, 7yxu - hFab + TNF receptor
    
  • 6ogx, 6okm, 6okn - hFab + TNFRSF4
    
  • 3l95 – hFab + NRR1
    
  • 1uj3, 4dtg – hFab + tissue factor
    
  • 3lev – hFab 2F5 + RNA polymerase sigma factor
    
  • 3ru8, 6mto, 6mtq, 6s3d – hFab + scaffold
    
  • 3skj – hFab + ephrin receptor
    
  • 3sob – hFab + LPR6
    
  • 5kn5 - hFab + protransforming growth factor alpha
    
  • 5c8j – hFab + protein MJ0480
    
  • 4zso – hFab + natural cytotoxicity triggering receptor
    
  • 4rrp, 6ayz, 6az2 - hFab + ASF1
    
  • 4qci - hFab + platelet factor B
    
  • 7ket, 7lcv - hFab + factor H BP
    
  • 4mxv - hFab + lymphotoxin
    
  • 8da0 - hFab + elapitoxin
    
  • 7seg - hFab + CD16
    
  • 6al5 - hFab + CD19
    
  • 5dmj, 5ihl, 6fax, 6pe8, 6pe9 - hFab + CD40
    
  • 6hxw - hFab + CD73
    
  • 3vg9, 3vga – hFab + adenosine receptor
    
  • 8gng – hFab + adenosine receptor + agonist
    
  • 2qqk, 2qql, 2qqn – hFab + neuropilin
    
  • 8d9y, 8d9z, 8sxp – hFab + cobra neurotoxin
    
  • 8da1 – hFab + krait bungarotoxin
    
  • 2vyr – hFab + MDM4
    
  • 6b0h, 6b0g, 6b0e, 6b0a, 6b08, 6azz - hFab + PFS25
    
  • 6hhc, 6r8x, 7k66, 7kbt - hFab + coagulation factor
    
  • 8v2e – hFab + B055
    
  • 8j7e – hFab + cytochrome b562
    
  • 8oxv, 8oxw, 8oxx, 8oxy – hFab + transglutaminase
    
  • 8g6i - hFab + coagulation factor VIII – Cryo EM
    
  • 5oca, 6u36, 6u38 - hFab + PCSK9
    
  • 5n88 - hFab + SFRS1-interacting protein
    
  • 5bk1, 5bjz - hFab + maltose-binding protein
    
  • 4hj0, 6dkj - hFab + GIPR
    
  • 4g80, 4g7y, 4g7v - hFab + VSP
    
  • 6cyf – hFab + secretion system protein
    
  • 6cw3 – hFab + histone acetyltransferase
    
  • 6m58 – hFab + serum albumin
    
  • 6mvl – hFab + VISTA
    
  • 6nmr, 6nms, 6nmt, 6nmu, 6nmv, 7kpg – hFab + SIRP-alpha
    
  • 7x8p – hFab + frizzled-2
    
  • 6o39 – hFab + frizzled-5
    
  • 6o3a, 6o3b – hFab + frizzled-7
    
  • 7x8q, 7x8t – hFab + frizzled-10
    
  • 6phb, 6phc, 6phd, 6phf – hFab + PFS25
    
  • 6r0x – hFab + G6B
    
  • 6o41, 6u8c – hFab + protein G
    
  • 6xxv – hFab + S2_1.2
    
  • 6c9u, 6mlk, 8ee0, 8ee1 – hFab + DEBS
    
  • 7m7e, 7m7f, 7m7g, 7m7h, 7m7i, 7m7j, 7s6c, 7s6d, 8tjn, 8tjo, 8tpx, 8tpw – hFab + DEBS – Cryo EM
    
  • 6o9h – hFab + ECD
    
  • 7dm1, 7dm2 – hFab + PstS-1
    
  • 6vgr - hFab + dipeptidase
    
  • 6vvu - hFab + tryptase
    
  • 6j14, 6j15, 7c88, 7e9b, 7vux, 7wsl, 8as0 - hFab + PD-1
    
  • 6vc9, 6vca - hFab + nucleotidase
    
  • 6i3z - hFab anti-antitrypsin + antitrypsin
    
  • 6xy2, 7elx, 7su0, 7su1 – hFab + CTLA
    
  • 6xmi – hFab + terminase
    
  • 6cbv – hFab + BRIL
    
  • 7khf – hFab + rifin
    
  • 6y9b – hFab + STEAP1
    
  • 6fn4 – hFab + ABCB
    
  • 7neq, 7nfd – hFab + ABCG2 – Cryo EM
    
  • 7nez – hFab + ABCG2 + drug – Cryo EM
    
  • 6bdz – hFab + ADAM-10
    
  • 7c61 – hFab + HT1B
    
  • 6m3b, 6m3c – hFab + vitamin K-dependent protein
    
  • 7mxl - hFab + pollen allergen – Cryo EM
    
  • 7ssv - hFab + Kv1.3 – Cryo EM
    
  • 7phu – hFab + RH5
    
  • 7ce2, 7oh0, 7oh1 – hFab + tetanus toxin
    
  • 7bbj – hFab + nucleotidase
    
  • 7lj4, 7lj5, 7lja, 7ljb – hFab + TRAAK
    
  • 7fci, 7vad – hFab + NTCP – Cryo EM
    
  • 7lk4 – hFab + Bcl-2
    
  • 7daa, 7xy8 – hFab + basigin
    
  • 7y1b – hFab + basigin – Cryo EM
    
  • 7mnl, 7mnm, 7mnn, 7mno – hFab + NUP358/RanBP
    
  • 7cj2 – hFab + YAK-40
    
  • 7e72 – hFab + angiopoietin receptor
    
  • 7rco – hFab + TGF
    
  • 7mlh – hFab + Der p 2
    
  • 7t0w, 7t0z – hFab + GABA – Cryo EM
    
  • 6ddm, 6ddv – hFab + MHC
    
  • 7pg8, 7pgb – hFab + Na+ channel
    
  • 7kzx, 7kzz – hFab + YiiP
    
  • 7amp, 7amq, 7amr, 7ams – hFab + T-cell receptor
    
  • 7dfp – hFab + Gi + dopamine receptor + drug – Cryo EM
    
  • 8w8b – hFab + Gi + se-hrotonin receptor – Cryo EM
    
  • 7lf7, 7lf8, 7lfa, 7lfb, 7lfd – hFab + ApoL
    
  • 7rth – hFab + hVHH
    
  • 7n0a – hFab + leukemia inhibitory factor
    
  • 8d7e – hFab + CNTFR – Cryo EM
    
  • 7zmk – hFab + microfibril-associated glycoprotein
    
  • 8df1 – hmFab + CHI3L1
    

• Human Fab: viral protein complex

• • 6e3h, 6d0u, 5vag, 3gbm, 3gbn, 3lzf, 3fku, 3sdy, 3ztj, 3ztn, 4fp8, 4fqi, 4fqj, 4fqk, 4fql, 4fqr, 4fqv, 4fqy, 4gxu, 4nm8, 5gjt, 5gjs, 5dur, 5c0s, 4yk4, 4py8, 5wko, 5w6g, 5w0d, 5w08, 5v2a, 5umn, 5kaq, 6cnv, 6e4x, 6ii4, 6ii8, 6ii9, 6ml8, 6e56, 4r8w, 6iut, 6iuv, 6oc3, 6ocb, 6p3r, 6q0e, 6q0h, 6q0i, 6q0l, 6q0o, 6q18, 6uig, 6ur5, 6urm, 6uyn, 6wex, 6wez, 6wf0, 6wf1, 6wiz, 6wj1, 7kqg, 7kqh, 7kqi, 7trh, 7u8j, 7u8l, 7u8m – hFab + Influenza virus hemagglutinin
    
  • 7k37, 7k39, 7k3a, 7k3b, 7kc1, 7l0l, 7mfg, 7scn, 7sco, 7x6l, 7x6o – hFab + Influenza virus hemagglutinin – Cryo EM
    
  • 6pze, 6pzf, 6pzy, 6pzz, 6q1z, 6q20, 6q23, 6u02 – hFab + Influenza virus neuraminidase
    
  • 6pzw, 6pzy, 6pzz, 6v4n, 6v4o, 8ez7 – hFab + Influenza virus neuraminidase – Cryo EM
    
  • 5gzo, 5gzn, 5lcv, 6nip, 6niu, 6plk – hFab + zika protein
    
  • 6lnt, 7bu8, 7bua, 7cbp, 7c2t, 7kcr – hFab + zika proteins – Cryo EM
    
  • 7bsd – hFab + zika virus NS1c
    
  • 7lse, 7lsf – hFab + tick-borne encephalitis virus proteins
    
  • 7lsg, 7sfv, 7sfw – hFab + tick-borne encephalitis virus proteins – Cryo EM
    
  • 6xob, 7v0n, 7v0o, 7v0p – hFab + eastern equine encephalitis virus protein - Cryo EM
    
  • 7ums – hFab + rotavirus proteins – Cryo EM
    
  • 5hj3, 5fhc, 6oz9, 6s8d, 6s8i, 6s8j – hFab + ebola envelope protein
    
  • 7kej – hFab + ebola spike glycoprotein – Cryo EM
    
  • 7kew, 7kex, 7kf9, 7kfb, 7kfe, 7kfh, 7m8l, 7swd – hFab + spike glycoprotein + ebola envelope protein – Cryo EM
    
  • 5n09, 4utb, 4uta, 4ut9, 4ut6 – hFab + dengue virus envelope protein
    
  • 4c2i, 7bub, 7bud, 7bue, 7buf, 7c2s, 7v3g, 7v3h, 7v3i, 7v3j, 8jn2, 8jn4 – hFab + dengue virus envelope protein - Cryo EM
    
  • 7bsc – hFab + dengue virus NS1c
    
  • 6vy4, 6vy6 – hFab + Hendra virus protein
    
  • 6ute – hFab + West Nile virus protein
    
  • 6vy5 – hFab + nipa virus receptor binding protein
    
  • 6blh, 6bli, 6oe4, 6ous, 6w52 – hFab + RSV fusion protein
    
  • 7luc, 7lue, 7mpg – hFab + RSV fusion protein – Cryo EM
    
  • 7t8w – hFab + RSV glycoprotein
    
  • 6mjz – hFab + respirovirus fusion protein
    

• • 4dag, 7sem – hFab + metapneumovirus glycoprotein F0
    
  • 7tl0, 8cw9 – hFab + metapneumovirus glycoprotein F0 – Cryo EM
    
  • 6p91, 6p95, 7s8h – hFab + lassa virus glycoprotein
    
  • 7tyv, 7uds, 7ul7 – hFab + lassa virus glycoprotein – Cryo EM
    
  • 7t4s – hFab + HCMV glycoprotein – Cryo EM
    
  • 7l7r – hFab + hemorrhagic fever virus glycoprotein
    
  • 6yo6 – hFab + LgHC3NB1
    
  • 7jie – hFab + norovirus VP1
    
  • 6gv4 – hFab + parechovirus proteins + RNA - Cryo EM
    
  • 7d5z, 7kbb – hFab + herpesvirus proteins
    
  • 6c5v, 7fbi, 7kdd, 7lbe, 7lbf, 7lbg, 7m30, 7t4q, 7t4r – hFab + herpesvirus proteins - Cryo EM
    
  • 8y3u - hFab + Ebola envelope glycoprotein – Cryo EM
    
  • 7mmn – Fab + Escherichia virus protein
    

• Mouse Fab: protein complex

• • 1tzh, 1tzi - mFab + VEGF
    
  • 1fsk, 5vfy, 7n0v - mFab + pollen allergen
    
  • 8ds5 – mFab + CD27
    
  • 3raj – mFab HB7 + CD38
    
  • 6u9s – mFab 5A6 + CD81
    
  • 7s11, 7s13 – mFab + CD96
    
  • 3o0r, 5gux – mFab + nitric oxide reductase
    
  • 1ahw - mFab 5G9+ tissue factor
    
  • 2w9e, 1tpx, 1tqb, 1tqc, 6aq7, 6suz, 6sv2 – mFAB + major prion protein
    
  • 2oz4 – mFab + intercellular adhesion molecule
    
  • 3eo1 - mFab GC-1008 + transforming growth factor β-3
    
  • 6z7w, 6z7y, 6z7z, 8oni – mFab + insulin
    
  • 4zxb – mFab 83 + insulin receptor
    
  • 1egj – mFab + cytokine receptor
    
  • 2bdn – mFab + cytokine A2
    
  • 1jrh – mFab + interferon-γ receptor
    
  • 1ob1 – mFab + major merozoite surface protein
    
  • 1qfw – mFab + gonadotropin
    
  • 4cad – mFab + RCE1
    
  • 4m48, 4xpt, 4xph, 4xpg, 4xpf, 4xpb, 4xpa, 4xp9, 4xp6, 4xp5, 4xp4, 4xp1, 4xnx, 4xnu, 6m0f, 6m3z, 7wgd, 7wgt, 7wlw – mFab + dopamine transporter
    
  • 9eup – mFab + dopamine transporter – Cryo EM
    
  • 5i75, 5i74, 5i73, 5i71, 5i6z, 5i6x, 6awq, 6awp, 6awo, 6awn, 6w2b, 6w2c – mFab + serotonin transporter
    
  • 6dzv, 6dzw, 6dzy, 6dzz, 6vrh, 6vrk, 6vrl, 7li6, 7li7, 7li8, 7li9, 7lia, 7lwd, 7mgw – mFab + serotonin transporter – Cryo EM
    
  • 8de3 – mFab + serotonin transporter + cocaine – Cryo EM
    
  • 1yjd – mFab 5.11A1 + CD28
    
  • 1sy6 – mFab OKT3 + CD3
    
  • 5dfv – mFab + CD81
    
  • 4r0l – mFab + CD28
    
  • 4qex, 4k2u – mFab + erythrocyte binding antigen
    
  • 2r9h, 6ad7, 6ad8, 6ada, 6adb, 6adc, 6k5a, 6k5i, 7cvs, 7cvt – mFab + exchange transporter ClCA
    
  • 1rjl – mFab + outer surface protein
    
  • 1mhh – mFab + protein L (mutant)
    
  • 1pg7 – mFab 6A6 + hmFab D3H44
    
  • 2jel – mFab JEL42 + histidine-containing protein
    
  • 1nsn – mFab N10 + nuclease
    
  • 1igc – mFab MOPC21 + streptococcal protein G
    
  • 1iai – mFab idiotipic + mFab anti-idiotypic
    
  • 7jlk, 7jln – mFab anti-idiotypic + hFab
    
  • 2r8s – mFab + RNA
    
  • 2fr4, 1xf2, 1xf3, 1xf4, 1i8m, 1cbv, 6idg – mFab + DNA
    
  • 7xlt – mFab + DNA + RNA – Cryo EM
    
  • 1mhp, 3q3g, 3qa3 – mFab + integrin
    
  • 3etb, 7o85 – mFab M18 (mutant) + anthrax-protective antigen
    
  • 3f5w, 3pjs, 3efd, 3eff, 2hjf, 2w0f, 4msw, 4uuj – mFab + KcsA K+ channel
    
  • 3stl, 3stz, 4i9w, 5ec2, 5ec1, 5ebw, 5ebm, 5ebl, 5e1a, 6nfu, 6nfv, 6pa0 - mFab + KcsA K+ channel (mutant)
    
  • 1kb5, 1nfd – mFab + T-cell receptor
    
  • 4i18 – mFab + pro-lactin receptor
    
  • 1uwx – mFab + protein G prime
    
  • 4ckd – mFab + β-galactosidase
    
  • 5tih – mFab + cysteine-rich protective antigen
    
  • 5t5n, 4rdq – mFab + bestrophin
    
  • 5e94 – mFab + glucagon-like receptor
    
  • 5e8d – mFab + proepiregulin
    
  • 5fb8 - mFab + interleukin
    
  • 5d96, 5d93 - mFab + sulfhydryl oxidase
    
  • 4ybq – mFab + fructose transporter
    
  • 4xzu, 7kbt - mFab + coagulation factor
    
  • 4u6h - mFab + virion membrane protein M25
    
  • 4r9y, 4r97 - mFab + platelet factor 4
    
  • 4qww - mFab + acetylcholinesterase
    
  • 4qti – mFab + urokinase-type plasminogen activator
    
  • 4pp2 – mFab + peptidase
    
  • 4p3d, 4p3c – mFab + metalloproteinase 14
    
  • 4ong, 4onf - mFab + amyloid-β A4 protein
    
  • 4oii - mFab + NS1
    
  • 5ldn – mFab + hexon C5
    
  • 5ldn – mFab + MIG-C4
    
  • 6vx4 – mFab + toxins – Cryo EM
    
  • 6elu – mFab + Trypanosoma protein
    
  • 6k65 – mFab + immunoglobulin G-binding protein
    
  • 6ks0, 6ks1 – mFab + adiponectin receptor protein
    
  • 7dr4 – mFab + IL-2
    
  • 6sxi – mFab + scFv
    
  • 6z2l – mFab + P113
    
  • 7kr5 – mFab + CRAC – Cryo EM
    
  • 6nyq – mFab + GLMP
    
  • 6vtw – mFab + RSV S4
    
  • 7st8 – mFab + SAS1B
    
  • 7vae, 7vaf, 7vag, 7wsi – mFab + NTCP – Cryo EM
    
  • 7xw6 – mFab in ML109 complex – Cryo EM
    
  • 7lr3, 7lr4 – mFab + hapless 2
    
  • 7kpj – mFab + Crohn diseae protein
    
  • 7c4s – mFab + S1P3
    
  • 7k7h, 7k7i – mFab + PltB – Cryo EM
    
  • 7rah – mFab + adenylate cyclase toxin
    
  • 7sbd, 7sbg – mFab + profilin
    
  • 7n0u – mFab + bet v 1
    
  • 7r9d – mFab + viVHH
    
  • 7jgj – mFab + IgA1
    
  • 7rd5 – mFab + tetraspanin
    
  • 7te6 – mFab + NMDA
    
  • 7te9, 7teb, 7tee, 7teq, 7ter, 7tes, 7tet – mFab + NMDA – Cryo EM
    
  • 7tuf, 7tug – mFab + tapasin
    
  • 7o7f – mFab + Gi + chemokine receptor – Cryo EM
    
  • 7t82, 7t87 – mFab + leukocidin + centyrin
    
  • 8eq6 - mFab + PD-1
    
  • 8scx - mFab + TIM23
    
  • 8e1m - mFab + TIM23 – Cryo EM
    
  • 8wdt – mFab + adenosine receptor + ligand
    

• Mouse Fab: viral protein complex

• • 6a0z, 1eo8, 1ken, 4mhh, 4mhj, 6n5b, 6n5d - mFab anti-influenza virus hemagglutinin
    
  • 4qnp, 1nca, 1ncb, 1ncc, 1ncd – mFab + influenza neuraminidase
    
  • 6n5e, 7fah – mFab + influenza hemagglutinin
    
  • 6wzt, 7dkj, 7jix, 7yhk – mFab + influenza hemagglutinin – Cryo EM
    
  • 1rvf – mFab 17-IA + intact rhinovirus
    
  • 3j3o, 3j3p- mFab + poliovirus proteins – cryoEM
    
  • 6mui, 6mw9, 6mwc, 6mwv, 6mwx - mFab + equine encephalitis virus proteins – cryoEM
    
  • 5kvg, 5kvf, 5kve, 5kvd, 5jhl, 6uta – mFab + zika envelope DIII
    
  • 3ve0 - mFab + Ebola envelope glycoprotein
    
  • 5y9t, 5y9c, 5y9f, 7ew5 – mFab + papilloma virus capsid protein
    
  • 4l5f, 6fla, 6flb, 6flc – mFab + dengue virus envelope protein
    
  • 5zud, 5zuf, 6aj7, 6aj9 – mFab + enterovirus caspid proteins – Cryo EM
    
  • 3fmg – mFab + rotavirus glycoprotein VP7
    
  • 3ixx, 3ixy - mFab E53 + envelope glycoprotein + West Nile virus peptide
    
  • 7ki6 – mFab + Hendra virus F0 – Cryo EM
    
  • 7ki4, 7txz, 7ty0 – mFab + nipah virus protein – Cryo EM
    
  • 7rfp – mFab + muromegalovirus GITR – Cryo EM
    
  • 7u9g, 8a1e – mFab + rabies virus glycoprotein – Cryo EM
    
  • 7kyl – mFab + deer tick virus glycoprotein
    
  • 7c80, 7c81, 7eaj, 7eak, 7cmk – mFab + echovirus glycoproteins – Cryo EM
    
  • 7m3l, 7m3m, 7m3n – mFab + parvovirus glycoproteins – Cryo EM
    
  • 7qu1 – mFab + marchupovirus glycoproteins
    
  • 7qu2 – mFab + mammarenavirus glycoproteins
    
  • 7dq7, 7tqs, 7tqu – mFab + coxsackievirus proteins – Cryo EM
    

• Anti-HIV Fab: protein complex or broadly neutralizing antibody complex

• • 3mac, 3ma9, 6fy1 – hFab anti-HIV 8062 + transmembrane glycoprotein
    
  • 3idx, 3idy, 2ny7, 4jpw, 4lsp, 4lsq, 4lsr, 4lss, 4lst, 4lsu, 4lsv, 5te4, 5fyl, 5f9w, 5f96, 5f6j, 4ywg, 4ye4, 4ydl, 4ydk, 4ydj, 4ydi, 4yc2, 4ybl, 4s1s, 4s1r, 4s1q, 4rwy, 4rfn, 5w4l, 5uwe, 6bck, 6bf4, 6d2p, 6db5, 6oej, 6ofi, 7klc, 7rdw, 7sx6, 7sx7 - hFab anti-HIV + gp120 core
    
  • 6b0n - hFab anti-HIV + gp140
    
  • 5v7j, 4j6r - hFab anti-HIV + gp160
    
  • 6dfg, 6dfh, 6e5p, 6pwu - hFab anti-HIV + gp160 – Cryo EM
    
  • 4xnz, 4xny, 4xmp, 7ekb, 7n05, 7n08 - hFab anti-HIV + gp41
    
  • 7n65 - hFab anti-HIV + gp41 – Cryo EM
    
  • 3lqa, 2qad - hFab anti-HIV + CD4 + gp41
    
  • 5jsa, 5js9, 5c7k, 5v8l, 5v8m, 6ccb, 6mft, 6orn, 6oro, 6orp, 6orq, 6utk, 6v6w, 7kmd, 7ucf - hFab anti-HIV + gp41 + gp120
    
  • 6nij, 6nqd, 6ulc, 6um5, 6um6, 6um7, 6vo3, 6vy2, 7kde, 7lg6, 7ll1, 7ll2, 7llk, 7pc2, 7rsn, 7rso, 7tfo, 8jtm - hFab anti-HIV + gp41 + gp120 – Cryo EM
    
  • 6opa, 6oz4 - hFab anti-HIV + gp41 + gp160
    
  • 6ozc, 7sq1 - hFab anti-HIV + gp41 + gp160 – Cryo EM
    
  • 6u0l, 6u0n - hFab anti-HIV + gp41 + gp160 + CD4 – Cryo EM
    
  • 4r4n, 4r4f, 6mg7, 6w4m - hFab anti-HIV + gp120 + M48U1
    
  • 7lok - hFab anti-HIV + gp120 + gp41 + M48U1 – Cryo EM
    
  • 6vpx - hFab anti-HIV + gp41 + gp120 + MPER peptide – Cryo EM
    
  • 5tfw, 5t85, 5t80, 5t6l, 5t5b, 5t29 - hFab anti-HIV + T117V2
    
  • 2x7l – hFab anti-HIV + HIV REV
    
  • 6cdm, 6cdo, 6cdp, 6ch8, 6ch9, 6chb, 6ck9, 6cxg, 6fy2, 6muf, 6myy, 6mzj, 6w03 – hFab anti-HIV + HIV protein
    
  • 6cde, 6cdi, 6edu, 7n28 – hFab anti-HIV + HIV protein – Cryo EM
    
  • 7lua – hFab anti-HIV + sHIV protein + gp120 – Cryo EM
    
  • 6uuh – hFab anti-HIV + IggG
    
  • 6mam – hFab anti-HIV + ebola glycoprotein
    
  • 6qd7, 6qd8 – hFab anti-HIV + ebola glycoprotein – Cryo EM
    
  • 6id4, 7re7 – hFab anti-HIV + MHC antigen + beta-2-microglobulin
    
  • 7stf, 8vrb – hFab anti-HIV + MHC antigen + beta-2-microglobulin – Cryo EM
    
  • 3bqu – hFab 2F5 anti-HIV + mFab 3H6
    
  • 6ce0, 6vlw, 6w16, 7mxd – hFab + HIV-1 protein
    
  • 7ly9, 7ucg – hFab + HIV-1 envelope protein – Cryo EM
    
  • 1g9m, 1g9n, 1gc1, 2i5y, 2i60, 2nxy, 2nxz, 2ny0, 2ny1, 2ny2, 2ny3, 2ny4, 2ny5, 2ny6, 3jwd, 3jwo, 5a8h, 5a7x, 4r4h, 4h8w - hFab anti-HIV + envelope glycoprotein gp120 + CD4
    
  • 6mtj, 6mtn, 6mu6, 6mu7, 6mu8, 6mug - hFab anti-HIV + HIV proteins + inhibitor
    
  • 6vkn, 6vn0, 6xrt, 7tfn - rmFab anti-HIV + gp41 + gp160 – Cryo EM
    
  • 6vlr, 7n0x, 7n8q – rmFab anti-HIV + HIV protein
    
  • 6xcj - rmFab anti-HIV + gp120 core
    
  • 6pw6, 6vo1 - bFab anti-HIV + gp41 + gp120 – Cryo EM
    
  • 1afv – mFab anti-HIV + capsid protein C
    
  • 6p8m, 7jks, 7jkt - mFab anti-HIV + gp120 core
    
  • 6cez, 6p65, 6vo0 – rFab anti-HIV + HIV protein – Cryo EM
    
  • 5dhz, 5dhy, 5dhx, 5dhv, 6cbp, 6nnf – hscFv anti-HIV + HIV protein
    
  • [[3rjq], 7r73, 7r74, 7ri1, 7ri2 – LgVHH anti-HIV + gp120
    
  • 7lpn – LgVHH anti-HIV + gp160 + gp41
    
  • 2xt1, 2xxm – ViVHH anti-HIV + HIV capsid
    

• Other Fab: protein complex

• • 3ld8, 3ldb – AhFab + bifunctional arginine demethylase
    
  • 3mj9 – AhFab HL4E10 + JAML
    
  • 3r08 - AhFab 2C11 + CD3ε
    
  • 1jps - hmFab D3H44 + tissue factor
    
  • 5f3h, 5f3b - hmFab + growth factor 8
    
  • 1pkq – hmFab 8-18C5 + myelin glycoprotein
    
  • 2b2x – rFab AQC2 + integrin
    
  • 4ht1 – rFab + TNF ligand 12
    
  • 6cf2 – rFab + REV
    
  • 2r56 – bFab igE + β-lactoglobulin
    
  • 1g6v – bFab + carbonic anhydrase
    
  • 7eo0, 7fei, 7fej – bFab + FMD virus proteins – Cryo EM
    
  • 4n9g - rmFab + scaffold
    
  • 8xc4 – rmFab + nipah virus protein
    
  • 8xn9, 8xnh – rmFab + nipah virus protein – Cryo EM
    
  • 6xgc – rmFab + Influenza virus hemagglutinin – Cryo EM
    
  • 8dul, 8dun – mFab + western equine encephalitis virus protein - Cryo EM
    
  • 7nks, 7nrh, 7o9s - rFab + hantavirus envelope polyprotein
    
  • 6z06 - vFab + hantavirus envelope polyprotein – vole
    
  • 7b09 - vFab + hantavirus envelope polyprotein – Cryo EM
    
  • 6oor – raFab + β-2-microglobulin + CD1D
    
  • 6e62 – raFab + malaria protein
    
  • 6qig – raFab + ADAMTS-13
    
  • 6al0, 6al1 – raFab + S2P
    
  • 7k22, 7k23 – raFab + VP1 – Cryo EM
    
  • 7kq7 – raFab + IL21R
    
  • 6gku – LgFab + galectin
    
  • 8hrx, 8hry – Fab + Na/bile acid cotransporter – muskrat – Cryo EM
    
  • 8cde – cFab + RH5 interacting protein + Cys-rich protective antigen – chicken - Cryo EM
    
  • 4hgk – Fab + albumin – shark
    

• • 6i8s - EcFab + plasminogen activator inhibitor – Escherichia coli
    
  • 6pis – Fab + TRAAK – Cricetulus migratorius
    
  • 7y7m, 7yms, 7yrf, 7yrh, 7yv7 – Fab + coxsackievirus proteins – coxsackievirus - Cryo EM
    

• Human Fab: protein higher complexes

• • 2wuc - hFab 40 + hepatocyte growth factor activator + inhibitor
    
  • 3d85 - hFab 7G10 + IL-12 + IL-23
    
  • 4xwo - hFab + ATPase GET3 + Sec22
    
  • 4xvu - hFab + ATPase GET3 + NYV1
    
  • 4xtr - hFab + ATPase GET3 + PEP12P peptide
    
  • 4xmn - hFab + Sec13 + Nup145 + Nup84 + Nup120 + Nup85
    
  • 4xmm - hFab + Sec13 + Nup145 + Nup84 + Nup120 + Nup85 + SEH1
    
  • 4mxw - hFab + TNFR-III + lymphotoxin
    
  • 3bt2 – hFab anti-UPAR + urokinase-type plasminogen activator + vitronectin
    
  • 6cw2 – hFab + histone acetyltransferase + transcriptional adapter
    
  • 6c08 – hFab + amino acid transporter + Arg
    
  • 6apd – hFab + RSV fusion protein + immunoglobulin + IGL
    
  • 6w51 – hFab + 2-b-microglobulin + MHC + p53 peptide
    
  • 8vr9 – hFab + 2-b-microglobulin + MHC + Kras peptide – Cryo EM
    
  • 7bbg – hFab + 2-b-microglobulin + MHC + wilms tumor peptide
    
  • 3gjf, 3hae – hFab + β-2-microglobulin + MHC antigen + NYESO peptide
    
  • 7bh8 – hFab + 2-b-microglobulin + MHC + VL9 peptide
    
  • 6o1f - hFab + trypsin inhibitor + tryptase
    
  • 7joo - hFab + LgVHH + ICOS
    
  • 6fn1, 7a65, 7a69, 7a6c, 7a6e, 7a6f – hFab + ABCB + drug
    
  • 6w9g - hFab + CD40 + fluorescent amino acid
    
  • 6ww2 – hFab + syVHH + frizzled-5 – Cryo EM
    
  • 7tdm, 7tdn – hFab + claudin + enterotoxin – Cryo EM
    
  • 7mhy – hFab + HHAT + palmitoyl-CoA – Cryo EM
    
  • 7ncs, 7nd0 – hFab in BAM complex – Cryo EM
    
  • 9clp – hFab + peptide + ecarin – Cryo EM
    

• Mouse Fab: protein higher complexes

• • 5w3e, 5w3l, 5w3m, 5w3o, 5w3p - mFab C5 + Rhinovirus protein 1 + protein 2 + protein 3 + protein 4
    
  • 3gb7, 2p7t, 2h8p, 2hfe, 2atk, 4wfh, 4wfg, 4wff, 4wfe, 5vk6, 5vke, 5vkh, 6by2, 6by3 - mFab + KcsA K+ channel + ion
    
  • 3or6, 3or7, 3ogc, 3fb7, 3f7v, 3f7y, 3fb5, 3fb6, 3fb8, 3iga, 2itc, 2itd, 2nlj, 2bob, 2boc, 1s5h, 1r3i, 1r3j, 1r3k, 1r3l, 1k4c, 1k4d, 3hpl - mFab + KcsA K+ channel (mutant) + ion
    
  • 2fd6 – mFab ATN-615 + urokinase-type plasminogen activator + urokinase plasminogen receptor
    
  • 4k24 – mFab + urokinase-type plasminogen activator + urokinase plasminogen receptor + vitronectin
    
  • 1j5o – mFab + reverse transcriptase + DNA
    
  • 1qkz – mFab + protein G prime + major outer membrane protein peptide
    
  • 2ibz – mFab + cytochrome bc1 complex + stigmatellin
    
  • 6jmq, 6jmr – mFab + large neutral amino acid transporter + 4f2 cell-surface antigen
    
  • 6qno - mFab + guanine nucleotide-binding protein + transducin + rhodopsin – Cryo EM
    
  • 7k78 - mFab + yeast nucleosome – Cryo EM
    
  • 7rxc, 7rxd - mFab + viVVH + ER lumen receptors – Cryo EM
    
  • 7c6a – mFab + angiotensin receptor + 1
    
  • 6gff – mFab + TGF + GARPIN
    
  • 7kpb – mFab + TNF + TNFR
    
  • 7df9, 7dfa, 7dfb, 7dfc – mFab + arrestin + arrestin receptor
    
  • 8tg9 – mFab + NPR1+ NPR1 receptor – Cryo EM
    

• Full Immunoglobulin

• • 1hzh - hFab IgG B12
    
  • 1iga - hIgA1 - model
    

• Fc Fragments or immunoglobulin gamma-1 heavy chain

• • 3dnk - hFc Igg1
    
  • 1qp1 – hFc BRE
    
  • 3muh – hFc PG9
    
  • 1f6a - hFc IgE + high-affinity receptor Fc (ε) RI (α)
    
  • 1fp5 - hFc IgE C ε 3-C ε 4
    
  • 6cjx, 6f2z, 6x3i - hFc (mutant)
    
  • 6iqg, 7mfr - hFc + peptide
    
  • 6d4i - rmFc Igg2
    
  • 6d4e, 6d4m - rmFc Igg3
    
  • 6d4n - rmFc Igg4
    
  • 8sip - mFc Igg + inosine
    

• Fv Fragments

• • 3zhd, 3zhk, 3zhl – hFv scaffold
    
  • 4u3x – hFv + lysozyme
    
  • 3dur, 3dus, 3duu, 3dv4, 3dv6 – mFv + Ig-like protein
    
  • 3hb3 – mFv + cytochrome c oxidase subunit 1-β
    
  • 1qle - mFv + cytochrome c oxidase
    
  • 6oik - mFv + AChR + Gi – Cryo EM
    

• Single chain variable fragment (scFv)

• • 6ehy, 6ehv, 6ehw, 6ehx, 5c2b, 5wym, 1x9q, 2a9m, 3kdm, 4buh, 3u6r, 3auv, 6qb9, 6qf9, 6vrp, 7ah1, 7yd3 – hscFv
    
  • 4x4x, 4x4y, 2a9n, 6vun, 6vuo, 6vup, 7kbm, 7kbo, 7kbp – hscFv (mutant)
    
  • 6ffj – hscFv anti-tumor
    
  • 6uup, 6uy3 – cscFv - camel
    
  • 6pil, 6psc – rscFv
    
  • 1h8n, 1nqb,4h0g, 4nkd, 4nkm, 4nko, 3nn8, 3bd3, 3bd4, 3bd5, 2gjj, 5b3n, 4laq, 4gqp, 3umt, 6s2i, 6tnp, 7aql, 7eq3, 7w7q, 8ytn – mscFv
    
  • 1p4i – mscFv (mutant)
    
  • 4p49, 4p48, 4ouo, 5vf6 – cscFv
    
  • 8dgr – scFv – artichoke mottled crinkle virus
    

• Single chain variable fragment complex

• • 5lbs – hscFv + zika envelope protein E
    
  • 5ljy – hscFv + Hantaan virus envelope protein
    
  • 7qqb – hscFv + Puumala virus envelope protein
    
  • 6pcu – hscFv + rotavirus capsid protein
    
  • 7cth – hscFv + dengue protein – Cryo EM
    
  • 4nik – hscFv + gankyrin
    
  • 5jz7 – hscFv + NGF
    
  • 4kv5 – hscFv + TGF
    
  • 5iwl – hscFv + CD47
    
  • 6tou – hscFv + rabies glycoprotein
    
  • 6ikm – hscFv + polyamine transport protein
    
  • 2ybr, 2yc1 – hscFv + CN2 toxin
    
  • 5ujz, 5uk0, 5uk1, 5uk2 - hscFv + hemagglutinin – Cryo EM
    
  • 4v1d - hscFv + mammal toxin CN2
    
  • 6i07 – hscFv + EpCAM
    
  • 6kn9 – hscFv + IL-18R
    
  • 5d9q – hscFv + antibody + gp120 + gp40
    
  • 7jum – hscFv + P230
    
  • 7tzg, 7tzh – hscFv + LAG3
    
  • 7xw7 – hscFv + thyrotropin receptor – Cryo EM
    
  • 6e0c, 6e0p - hscFv in nucleosome – Cryo EM
    
  • 8dpf, 8dpg, 8dph, 8dpi – hscFv + Gi + 5HT2C receptor + drug – Cryo EM
    
  • 7jvr – hscFv + Gi + dopamine receptor + drug – Cryo EM
    
  • 7tuz – hscFv + Gi + GPR183 + drug – Cryo EM
    
  • 8fx5 – hscFv + Gi + AchR + agonist – Cryo EM
    
  • 7trk, 7trs – hscFv + Gi + AchR + agonist – Cryo EM
    
  • 7t94 – hscFv + Gi + AchR + modulator – Cryo EM
    
  • 7trq – hscFv + Gi + AchR + agonist + modulator – Cryo EM
    
  • 9ijd – hscFv + Gi + adrenergic receptor + carazolol – Cryo EM
    
  • 9ije – hscFv + Gi + VHH + adrenergic receptor + epinephrine + adrenaline – Cryo EM
    
  • 8iz4 – hscFv + Gi + G protein coupled receptor – Cryo EM
    
  • 7wj5 – hscFv + Gi + somatostatin receptor – Cryo EM
    
  • 7xms – hscFv + Gi + somatostatin receptor + somatostatin – Cryo EM
    
  • 8iul, 8xjn – hscFv + Gi + prostaglandin receptor – Cryo EM
    
  • 7d3k, 7d3l, 7d3m, 7d3r – bscFv + FMDV proteins – Cryo EM
    
  • 7y58 – cscFv + antiseptic resistance protein
    
  • 3ab0 – mscFv + BCLA protein
    
  • 5jyl, 5jym – mscFv + cadherin
    
  • 5f3j – mscFv + duffy receptor
    
  • 5dfw, 6ejg, 6ejm, 6ek2 – mscFv + CD81
    
  • 2kh2 – mscFv + IL-1 - NMR
    
  • 4yqx – mscFv + IL-2
    
  • 3h3b – mscFv + ERBB2
    
  • 8axh – mscFv + mucin-1
    
  • 5ogi – mscFv + hexon protein
    
  • 3h3b, 6eqc – mscFv + hexon protein – Cryo EM
    
  • 7rkf, 7rkm, 7rkn, 7rkx, 7rky – mscFv + Gi + US27 – Cryo EM
    
  • 7xmt – mscFv + Gi + SSTR4 – Cryo EM
    
  • 7jhj – mscFv + Gi + BILF1 – Cryo EM
    
  • 8iy9, 8iyh, 8iyw, 8jer, 8jhn – mscFv + Gi + hydroxycarboxylic acid receptor – Cryo EM
    
  • 9ayf – mscFv + Gi + calcium sensing receptor – Cryo EM
    
  • 8jzz – mscFv + Gi + anaphylatoxin – Cryo EM
    
  • 8i9s – mscFv + Gi + anaphylatoxin receptor – Cryo EM
    
  • 8hqc, 8i9l, 8ia2 – mscFv + Gi + anaphylatoxin receptor + anaphylatoxin – Cryo EM
    
  • 8hpt – mscFv + Gi + anaphylatoxin receptor + peptide – Cryo EM
    
  • 8i97, 8i9a, 8j6d – mscFv + Gi + anaphylatoxin receptor + EP peptide – Cryo EM
    
  • 8i95 – mscFv + Gi + EP peptide – Cryo EM
    
  • 7qvm – mscFv + Gi + oxytocin receptor + oxytocin – Cryo EM
    
  • 8feg – mscFv + Gi + kappa opioid receptor + semi peptide – Cryo EM
    
  • 7yoo – mscFv + Gi + neuropeptide – Cryo EM
    
  • 7vgx, 7yon – mscFv + Gi + neuropeptide receptor + neuropeptide – Cryo EM
    
  • 7p02 – mscFv + Gi + neurokinin receptor – Cryo EM
    
  • 7trs – mscFv + Gi + AchR + agonist – Cryo EM
    
  • 7t8x – mscFv + Gi + AchR – Cryo EM
    
  • 7na8 – mscFv + Gi + ghrelin + agonist – Cryo EM
    
  • 4f9p, 4f9l – mscFv + BTN3A1
    
  • 5aam, 5aaw, 7k93 – mscFv + Dengue virus envelope protein
    
  • 5kov – mscFv + Astrovirus envelope protein
    
  • 7rk1 – mscFv + Astrovirus VP70
    
  • 7rk2 – mscFv + Astrovirus VP25
    
  • 6h3t, 6h3u – mscFv + bovine schmallenberg virus envelope protein
    
  • 1dzb, 2znx – mscFv + lysozyme
    
  • 1a14, 1nmc – mscFv + neuraminidase
    
  • 5gs2 – mscFv + MBP + repebody
    
  • 1fo0, 1kj2, 1nam – mscFv + TCR + MHC + peptide
    
  • 7k5x, 7k5y, 7k60, 7k61, 7k63 - mscFv + human nucleosome – Cryo EM
    
  • 6lgw – rmscFv + rabies glycoprotein
    
  • 8iuk, 8ium – mscFv + nanobody + Gi + prostaglandin receptor – Cryo EM
    
  • 9axf – mscFv + nanobody + Gi + calcium-sensing receptor – Cryo EM
    

• Single chain variable fragment complex with small molecule

• • 5i4f, 5vf2 – mscFv + mannobiose
    
  • 4h0i – mscFv + mannopyranoside
    
  • 2cju – mscFv + phOxGABA
    
  • 2uud – mscFv + hapten
    
  • 5j74, 5j75 – hscFv + inhibitor
    
  • 4lar – hscFv + dexedrine
    
  • 4las – hscFv + amphetamine derivative
    
  • 6k4z – mscFv + NPA
    

• Single chain variable fragment complex with peptide

• • 5yax – hscFv + HBV peptide
    
  • 5a2i, 5aij, 5a2k, 5a2l – mscFv + TN peptide
    
  • 1p4b – mscFv + GCN4 peptide
    
  • 4h0h, 5fxc, 5owp, 1ktr, 6fzq, 6tgg – mscFv + peptide
    

• Single domain antibody VHH or Camelid antibody or nanobody or single domain antibody or sybody

• • 5i0z, 5c6w – hVHH
    
  • 6cnw – hyVHH - hybrid
    
  • 4ppt, 4idl, 1shm, 2xa3, 5sv4, 4w81, 4w70, 4w68, 4tyu, 6ezw, 6f0d, 5nlu, 4krn, 4poy, 1sjv, 1u0q, 3qxu, 3qxw, 4b50, 5tp3, 1sjx, 5h8d, 4b5e, 6dbd, 6fpv, 6fys, 6oc8, 6ru3, 7lvu – LgVHH
    
  • 1g9e, 7eh3 – LgVHH - NMR
    
  • 4u05 – LgVHH (mutant)
    
  • 4w2p, 6apo, 6app, 6apq – LgVHH anti-marburg virus
    
  • 6ck8 – LgVHH anti-influenza virus
    
  • 7piu – LgVHH + Gi + melanocortin receptor + semelanotide – Cryo EM
    
  • 8xgr – LgVHH + Gi + endothelin receptor + endothelin – Cryo EM
    
  • 6cwk – ViVHH anti-ricin
    
  • 6dyx, 6iyn – ViVHH
    
  • 8j5j – ViVHH + bat spiake protein
    
  • 5u64, 5u65, 1f2x, 1yc7, 5e7b, 5m7q, 5jmr, 3dwt, 3tpk, 3ln9, 6heq, 6jb9, 6qtl – cVHH
    
  • 1yc8, 3eak – cVHH (mutant)
    
  • 6itp, 6itq – cVHH anti-cortisol
    
  • 6t2j, 7mfv – syVHH
    

• VHH binary complexes

• • 6oan, 6oao – hVHH + DBP
    
  • 6sge – hVHH + ROHB
    
  • 7ssz - hVHH + Kv1.3 – Cryo EM
    
  • 1i3u, 1i3v, 1dq0 - LgVHH + hapten
    
  • 3qxt, 3qxv – LgVHH + methotrexate
    
  • 4pou, 1bzq – LgVHH + RNAse 1
    
  • 4nc1, 4nbx, 4nby, 4nbz, 4nc0, 4nc2 – LgVHH + TcdA
    
  • 3k81, 3stb, 4dk3, 4dk6, 4dka, 3k7u, 3k80 – LgVHH + RNA editing complex protein
    
  • 5tok, 5toj – LgVHH + F glycoprotein
    
  • 5boz, 5j57, 5j56, 5e1h, 5sv3, 7kbi, 7kbk, 7kc9, 7kd0, 7kd2, 7kdm, 7kdu – LgVHH + ricin
    
  • 5hm1 – LgVHH + gp41
    
  • 5o2u – LgVHH + p24
    
  • 4grw – LgVHH + IL-23
    
  • 5nqw – LgVHH + IGE-FC
    
  • 4hep, 4hem – LgVHH + BPP
    
  • 4w2q, 4w2o, 6app – LgVHH + Marburg virus nucleoprotein
    
  • 6fyt, 6fyu, 6fyw, 6s0y – LgVHH + Influenza virus protein
    
  • 6qx3 – LgVHH + Influenza virus protein – Cryo EM
    
  • 7dst – LgVHH + FMDV proteins – Cryo EM
    
  • 7jkm – LgVHH + hFab
    
  • 6ana, 6and, 6ani – LgVHH + mFab
    
  • 4krl, 4krm – LgVHH + EGFR
    
  • 2bse – LgVHH + receptor-binding protein
    
  • 4ej1, 4eiz, 4eig – LgVHH + DHFR
    
  • 3p0g, 4lde, 4ldl, 4ldo, 6mxt, 7bu7 – LgVHH + adrenergic receptor
    
  • 4n1h, 4m3k, 5lwf – LgVHH + beta-lactamase
    
  • 5m95, 5m94, 4wgw, 4wgv – LgVHH + metal cation transporter
    
  • 5h8o, 6f2g – LgVHH + ASC
    
  • 3k3q – LgVHH + Botox
    
  • 4wem, 4wen, 4weu – LgVHH + adhesin
    
  • 4p2c – LgVHH + Shiga toxin
    
  • 6oq5, 6oq6, 6oq7, 6oq8 – LgVHH + Clostridium toxin
    
  • 6hjx, 6ssi – LgVHH + ELIC
    
  • 4aq1 – LgVHH + SBSB
    
  • 6h7j, 6h7l, 6h7m, 6h7n – lgVHH + thioredoxin + adrenergic receptor
    
  • 6u51, 6u52, 6u54, 6u55 – LgVHH anti-ebola + nucleoprotein
    
  • 7lvw – LgVHH + RSV fusion protein
    
  • 6qup – LgVHH + receptor kinase
    
  • 6qgy – LgVHH + BamA
    
  • 6rvc – LgVHH + PTCH1
    
  • 6z6v – LgVHH + complement C1
    
  • 7qiv – LgVHH + complement C3b
    
  • 6h15 – LgVHH + LRP6
    
  • 6b73 – LgVHH + opioid receptor
    
  • 6i8g – LgVHH + EDS1
    
  • 6hhu – LgVHH + SAP
    
  • 6c9w – LgVHH + lactose permease
    
  • 6h02 – LgVHH + mediator of RNA polymerase
    
  • 6gs4 – LgVHH + DtpA
    
  • 6z1v – LgVHH + CD9
    
  • 6f5g - LgVHH + PCSK9
    
  • 7d4b - LgVHH + TNFRSF9
    
  • 7nmu - LgVHH + platelet glycoprotein
    
  • 7a6o - LgVHH + von willenbrand factor
    
  • 7a48, 7a4d, 7a4t, 7a4y, 7a50 - LgVHH + coiled-coil
    
  • 7qcq - LgVHH + Tau peptide
    
  • 7jjo - LgVHH + Gi proteins + adrenergic receptor
    
  • 7sai – LgVHH + GFP
    
  • 7a17 – LgVHH + synaptojanin
    
  • 7ckz – LgVHH + Gi proteins + dopamine receptor – Cryo EM
    
  • 4tvs – viVHH + LAP1
    
  • 4yga – ViVHH + CDPK1
    
  • 5l21 – ViVHH + Botox
    
  • 5o04, 5o02, 5o03, 5o05, 5tjw, 5omn, 4x7c, 4x7d, 4x7e, 4x7f, 5m30, 6h6y, 6h71, 6h72, 6xw4, 6xw5, 6xw6 – ViVHH + virus capsid
    
  • 2xv6 – ViVHH + p24
    
  • 5hvf, 5hvg, 5hvh – ViVHH + carboxypeptidase
    
  • 5hgg, 5lhr, 5lhq, 5lhp, 5lhn – ViVHH + urokinase-type plasminogen activator
    
  • 6gwn, 6gwp, 7aqg – ViVHH + plasminogen activator inhibitor
    
  • 5vxm, 5vxj, 5vxk, 5vxl, 5vlj - ViVHH + invasion IpaD
    
  • 5u4l, 4z9k, 4lhj, 4lgp, 6cwg, 5u4m, 6obc, 6obe, 6obg, 6obm, 6obo, 6oca, 6ocd – ViVHH anti-ricin + ricin
    
  • 6x06, 6x07, 6x08, 7nqa – ViVHH + nucleoporin
    
  • 6rah, 6rai – ViVHH + TmrAB
    
  • 7k7y, 7lzp – ViVHH + botulinum neurotoxin
    
  • 1jto, 1jtp, 1jtt, 1ri8, 1xfp, 1zmy, 1zv5, 1zvh, 4i0c, 1op9, 1mel, 1rjc, 1zvy, 6jb8 – cVHH + lysozyme
    
  • 6jb2, 6jb5 – cVHH (mutant) + lysozyme
    
  • 2x89 – cVHH + β-2-microglobulin
    
  • 1kxq, 1kxt, 1kxv – cVHH + α-amylase
    
  • 3qsk, 2p42, 2p43, 2p44, 2p45, 2p46, 2p47, 2p48, 2p49, 2p4a – cVHH + RNAse 1
    
  • 6ir1, 6ir2, 7sal – cVHH + mCherry
    
  • 6lr7 – cVHH + GFP
    
  • 6rpj – cVHH + CTLA
    
  • 6hhd – cVHH + major prion protein
    
  • 6knm - cVHH + apelin receptor
    

• VHH ternary complexes

• • 3v0a – LgVHH + BONT/A1 + NTNH
    
  • 3sn6 – LgVHH + adrenergic receptor + guanine nucleotide-binding protein
    
  • 7bts, 7bu6 – LgVHH + adrenergic receptor + epinephrine
    
  • 6oya - LgVHH + Gi + rhodopsin + GT-alpha/GI1-alpha – Cryo EM
    
  • 4laj - LgVHH + envelope glycoprotein gp120 + CD4
    
  • 4orz – LgVHH + tyrosine protein kinase HCK + NEF
    
  • 4kro, 4krp – LgVHH + antibody + EGFR
    
  • 7q6c – LgVHH + complement C1 + antibody
    
  • 5j1s, 5j1t – ViVHH + Torsin + LULL1
    
  • 5uk4, 5ukb – ViVHH + virus capsid + RNA
    
  • 5jmo – cVHH + furin + CMK inhibitor
    
  • 5fuc – cVHH + IL-6 + IL-6R
    
  • 6h7j, 6h7l, 6h7m, 6h7o, 6ibl – cVHH + thioredoxin + adrenergic receptor
    
  • 6n48 – cVHH + modulator + adrenergic receptor
    

• Intrabody or anti-helix antibody

• • 6k67 – hIB 3LRH + calmodulin
    
  • 6k3m, 6k64, 6k6a, 6k6b – hIB 3LRH + SpA IgG-binding domain protein
    
  • 6k69 – hIB 3LRH + T4 lysozyme
    

• Diabody

• • 5fcs, 5grv, 5grw, 5grx, 5gry, 5grz, 5gs0, 5gs1, 5gs3, 6kr0, 7eq3 – hDiab
    
  • 4y5v, 4y5x, 4y5y – hDiab + EpoR
    
  • 5gru – hDiab + MBP
    
  • 5gs0 – hDiab + TLR3
    
  • 5iwl – hDiab + CD47
    
  • 6vug – hDiab + Hiv reverse transcriptase + DNA
    
  • 1lmk – mDiab
    

• Antibody VH domain (residues 1-121)

• • 1t2j, 3b9v, 3qyc, 7obf, 7omn, 7ooi – hVH
    
  • 1vhp – hVH - NMR
    
  • 7d6y, 7d8b, 7f07, 7xtp – hVH + EIF4E
    
  • 4u3x – hVH + lysozyme
    
  • 7dv4 – hVH + CTLA-4
    
  • 5fv2 – hVH + VEGF
    
  • 8di5 – hVH + SARS spike glycoprotein – Cryo EM
    
  • 1nqb – mVH
    
  • 4qgy, 4qlr – LgVH
    
  • 8fsl – EcVH + meothelin
    

• Bispecific antibody or biparatopic antibody

• • 5vr9, [[5vsh, 6nov]] – hBSab
    
  • 4bsv, 4bsw – hBSFc heterodimeric (mutant)
    
  • 7wop, 7woq, 7wor, 7wos, 7wou, 7wov, 7wow, 7y6k, 7yc5, 8jin, 8jmm, 8yww, 8ywx – hBSab + SARS spike glycoprotein – Cryo EM
    
  • 8elo – hBSab + nanobody + SARS spike glycoprotein
    
  • 9f34 – hBSab + Gi + dopamine receptor – Cryo EM
    
  • 8fis, 8tni – hBSab anti-HIV + gp120 + gp41 – Cryo EM
    
  • 8tft – hBSab + mucin receptor
    
  • 6ba5 - hBFab + tyrosine protein kinase receptor
    
  • 8wsn – hBSab + SFTSV protein
    
  • 8hlb – hBSab + TNFR2 – Cryo EM
    
  • 8che – hBSab + TLT-1
    
  • 7yds – hBSab anti-PD-L1 + PD-L1
    
  • 8tbb – hBSab + TIM3
    
  • 7ahv – hBSab + FIXa
    
  • 7xjf – hBSab + CD47
    
  • 6t9e – hBSab + PDGF
    
  • 6t9d – hBSab + VEGF121
    
  • 8wsu – hBSab + SFTV glycoprotein
    
  • 7ahu - hBSab + coagulation factor
    
  • 8cn9 - hBSab + coagulation factor + tissue factor
    
  • 5hy9 – hBSIgg
    
  • 5di8, 5dj0, 5dj2, 5dj6, 5dj8, 5dja, 5djc, 5djd, 5djx, 5djy, 5djz, 5dk0, 5dk2 – hBSIgg + peptide
    
  • 8c7j, 8ctv – haBSab
    
  • 6v7y, 6v7z – LgBSVHH + CD1D + beta-2-microglobulin
    
  • 6v80 – LgBSVHH + CD1D + beta-2-microglobulin + TCR
    
  • 8fwh – mBSab anti-LAG3
    
  • 8vy4 – mBSab + peptide
    
  • 8yj5, 8yj8 – viBSVHH + MTSA
    
  • 8yj7 – raBSscFv + MTSA
    
  • 8yj6 – BSscFv anti-MTSA – Strptococcus pyogenes
    

• Polyclonal antibody

• • 8tp2, 8tp3, 8tp4, 8tp5, 8tp6, 8tp7, 8tp9, 8tpa – hPCab + Influenza virus hemagglutinin – Cryo EM
    
  • 9cj7 – hPCab + Lassa virus glycoprotein – Cryo EM
    
  • 7mdt, 8t2e, 8t2f – hPCab + HIV glycoprotein – Cryo EM
    
  • 7sb3, 7sb4, 7sb5, 7sbu, 7sbv, 7sbw, 7sbx, 7sby – SARS glycoprotein – Cryo EM
    
  • 8sw7, 8swv, 8sww, 8swx – maPCab + HIV-1 glycoprotein – Cryo EM
    
  • 7l86, 7l87, 7l88, 7l89, 7l8a, 7l8b, 7l8c, 7l8d, 7l8f, 7l8g, 7l8s, 7l8t, 7l8u, 7l8w, 7l8x, 7l8y, 7l8z, 7l90, 7lu9, 7mxe - rmFab anti-HIV + gp41 + gp120 – Cryo EM
    
  • 7l8e - rPCab anti-HIV + gp160 – Cryo EM
    
  • 8tyc, 8tye, 8vcv, 8ve8, 9cj8, 9ck7, 9ck8 – rPCab + Lassa virus glycoprotein – Cryo EM
    
  • 7utp, 7utr, 7uts, 7utu, 7utv – PCab – cat lupus – Cryo EM
    
  • 7tqs, 7tqt, 7tqu – mPCab + Coxsackievirus glycoprotein – Cryo EM
    

• Ultralong antibody

• • 4k3d, 4k3e, 5e99, 5ihu, 5ijv, 5ilt, 6e8v, 6e9g, 6e9h, 6e9i, 6e9k, 6e9q, 6e9u, 8bs8, 8cif, 8ecq, 8ecv, 8ecz, 8ed1, 8p2t, 8p6h – bUab
    
  • 8vbj, 8vbk, 8vbl, 8vbm, 8vbn, 8vbo, 8vbp, 8vbq, 8vbr – bUab anti-HIV
    
  • 9g6v – bUab + FMDV glycoproteins – Cryo EM
    
  • 8edf – bUab + SARS glycoproteins
    
  • 8tq1 – bUab + HIV glycoproteins – Cryo EM
    

}}