1olr

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[[Image:1olr.jpg|left|200px]]
 
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{{Structure
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==The Humicola grisea Cel12A Enzyme Structure at 1.2 A Resolution==
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|PDB= 1olr |SIZE=350|CAPTION= <scene name='initialview01'>1olr</scene>, resolution 1.2&Aring;
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<StructureSection load='1olr' size='340' side='right'caption='[[1olr]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
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|SITE= <scene name='pdbsite=CA1:Catalytic+Acid+Base,+GLU+205'>CA1</scene>
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[1olr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichocladium_griseum Trichocladium griseum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OLR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OLR FirstGlance]. <br>
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|ACTIVITY= [http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1olr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1olr OCA], [https://pdbe.org/1olr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1olr RCSB], [https://www.ebi.ac.uk/pdbsum/1olr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1olr ProSAT]</span></td></tr>
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</table>
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'''THE HUMICOLA GRISEA CEL12A ENZYME STRUCTURE AT 1.2 A RESOLUTION'''
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== Function ==
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[https://www.uniprot.org/uniprot/Q8NJY3_9PEZI Q8NJY3_9PEZI]
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== Evolutionary Conservation ==
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==Overview==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ol/1olr_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1olr ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
As part of a program to discover improved glycoside hydrolase family 12 (GH 12) endoglucanases, we have extended our previous work on the structural and biochemical diversity of GH 12 homologs to include the most stable fungal GH 12 found, Humicola grisea Cel12A. The H. grisea enzyme was much more stable to irreversible thermal denaturation than the Trichoderma reesei enzyme. It had an apparent denaturation midpoint (T(m)) of 68.7 degrees C, 14.3 degrees C higher than the T. reesei enzyme. There are an additional three cysteines found in the H. grisea Cel12A enzyme. To determine their importance for thermal stability, we constructed three H. grisea Cel12A single mutants in which these cysteines were exchanged with the corresponding residues in the T. reesei enzyme. We also introduced these cysteine residues into the T. reesei enzyme. The thermal stability of these variants was determined. Substitutions at any of the three positions affected stability, with the largest effect seen in H. grisea C206P, which has a T(m) 9.1 degrees C lower than that of the wild type. The T. reesei cysteine variant that gave the largest increase in stability, with a T(m) 3.9 degrees C higher than wild type, was the P201C mutation, the converse of the destabilizing C206P mutation in H. grisea. To help rationalize the results, we have determined the crystal structure of the H. grisea enzyme and of the most stable T. reesei cysteine variant, P201C. The three cysteines in H. grisea Cel12A play an important role in the thermal stability of this protein, although they are not involved in a disulfide bond.
As part of a program to discover improved glycoside hydrolase family 12 (GH 12) endoglucanases, we have extended our previous work on the structural and biochemical diversity of GH 12 homologs to include the most stable fungal GH 12 found, Humicola grisea Cel12A. The H. grisea enzyme was much more stable to irreversible thermal denaturation than the Trichoderma reesei enzyme. It had an apparent denaturation midpoint (T(m)) of 68.7 degrees C, 14.3 degrees C higher than the T. reesei enzyme. There are an additional three cysteines found in the H. grisea Cel12A enzyme. To determine their importance for thermal stability, we constructed three H. grisea Cel12A single mutants in which these cysteines were exchanged with the corresponding residues in the T. reesei enzyme. We also introduced these cysteine residues into the T. reesei enzyme. The thermal stability of these variants was determined. Substitutions at any of the three positions affected stability, with the largest effect seen in H. grisea C206P, which has a T(m) 9.1 degrees C lower than that of the wild type. The T. reesei cysteine variant that gave the largest increase in stability, with a T(m) 3.9 degrees C higher than wild type, was the P201C mutation, the converse of the destabilizing C206P mutation in H. grisea. To help rationalize the results, we have determined the crystal structure of the H. grisea enzyme and of the most stable T. reesei cysteine variant, P201C. The three cysteines in H. grisea Cel12A play an important role in the thermal stability of this protein, although they are not involved in a disulfide bond.
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==About this Structure==
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The Humicola grisea Cel12A enzyme structure at 1.2 A resolution and the impact of its free cysteine residues on thermal stability.,Sandgren M, Gualfetti PJ, Paech C, Paech S, Shaw A, Gross LS, Saldajeno M, Berglund GI, Jones TA, Mitchinson C Protein Sci. 2003 Dec;12(12):2782-93. PMID:14627738<ref>PMID:14627738</ref>
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1OLR is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Humicola_grisea Humicola grisea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OLR OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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The Humicola grisea Cel12A enzyme structure at 1.2 A resolution and the impact of its free cysteine residues on thermal stability., Sandgren M, Gualfetti PJ, Paech C, Paech S, Shaw A, Gross LS, Saldajeno M, Berglund GI, Jones TA, Mitchinson C, Protein Sci. 2003 Dec;12(12):2782-93. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14627738 14627738]
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</div>
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[[Category: Cellulase]]
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<div class="pdbe-citations 1olr" style="background-color:#fffaf0;"></div>
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[[Category: Humicola grisea]]
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[[Category: Single protein]]
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[[Category: Berglund, G I.]]
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[[Category: Gross, L S.]]
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[[Category: Gualfetti, P J.]]
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[[Category: Jones, T A.]]
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[[Category: Mitchinson, C.]]
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[[Category: Saldajeno, M.]]
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[[Category: Sandgren, M.]]
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[[Category: Shaw, A.]]
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[[Category: cellulase]]
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[[Category: cellulose degradation]]
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[[Category: endoglucanase]]
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[[Category: gh family 12]]
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[[Category: glycosyl hydrolase]]
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[[Category: humicola grisea cel12a]]
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[[Category: hydrolase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:12:30 2008''
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==See Also==
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*[[Glucanase 3D structures|Glucanase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Trichocladium griseum]]
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[[Category: Berglund GI]]
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[[Category: Gross LS]]
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[[Category: Gualfetti PJ]]
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[[Category: Jones TA]]
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[[Category: Mitchinson C]]
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[[Category: Saldajeno M]]
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[[Category: Sandgren M]]
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[[Category: Shaw A]]

Current revision

The Humicola grisea Cel12A Enzyme Structure at 1.2 A Resolution

PDB ID 1olr

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