2dwf

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /> <applet load="2dwf" size="450" color="white" frame="true" align="right" spinBox="true" caption="2dwf" /> '''NMR structure of Mini-B, an N-terminal- C-t...)
Current revision (09:05, 6 November 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2dwf.gif|left|200px]]<br />
 
-
<applet load="2dwf" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2dwf" />
 
-
'''NMR structure of Mini-B, an N-terminal- C-terminal construct from human Surfactant Protein B (SP-B), in Sodium dodecyl sulfate (SDS) micelles'''<br />
 
-
==Disease==
+
==NMR structure of Mini-B, an N-terminal- C-terminal construct from human Surfactant Protein B (SP-B), in Sodium dodecyl sulfate (SDS) micelles==
-
Known disease associated with this structure: Surfactant metabolism dysfunction, pulmonary, 1 OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=178640 178640]]
+
<StructureSection load='2dwf' size='340' side='right'caption='[[2dwf]]' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[2dwf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DWF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DWF FirstGlance]. <br>
-
2DWF is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2DWF OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 15 models</td></tr>
-
[[Category: Single protein]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dwf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dwf OCA], [https://pdbe.org/2dwf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dwf RCSB], [https://www.ebi.ac.uk/pdbsum/2dwf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dwf ProSAT]</span></td></tr>
-
[[Category: Booth, V.]]
+
</table>
-
[[Category: Keough, K.M.W.]]
+
== Disease ==
-
[[Category: Sarker, M.]]
+
[https://www.uniprot.org/uniprot/PSPB_HUMAN PSPB_HUMAN] Defects in SFTPB are the cause of pulmonary surfactant metabolism dysfunction type 1 (SMDP1) [MIM:[https://omim.org/entry/265120 265120]; also called pulmonary alveolar proteinosis due to surfactant protein B deficiency. A rare lung disorder due to impaired surfactant homeostasis. It is characterized by alveolar filling with floccular material that stains positive using the periodic acid-Schiff method and is derived from surfactant phospholipids and protein components. Excessive lipoproteins accumulation in the alveoli results in severe respiratory distress.<ref>PMID:7491219</ref> Genetic variations in SFTPB are a cause of susceptibility to respiratory distress syndrome in premature infants (RDS) [MIM:[https://omim.org/entry/267450 267450]. RDS is a lung disease affecting usually premature newborn infants. It is characterized by deficient gas exchange, diffuse atelectasis, high-permeability lung edema and fibrin-rich alveolar deposits called 'hyaline membranes'. Note=A variation Ile to Thr at position 131 influences the association between specific alleles of SFTPA1 and respiratory distress syndrome in premature infants.<ref>PMID:11063734</ref>
-
[[Category: Waring, A.J.]]
+
== Function ==
-
[[Category: lipid associated protein]]
+
[https://www.uniprot.org/uniprot/PSPB_HUMAN PSPB_HUMAN] Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.
-
[[Category: mini-b]]
+
== References ==
-
[[Category: sp-b]]
+
<references/>
-
[[Category: surfactant protein b]]
+
__TOC__
-
 
+
</StructureSection>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 21:40:35 2007''
+
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Booth V]]
 +
[[Category: Keough KMW]]
 +
[[Category: Sarker M]]
 +
[[Category: Waring AJ]]

Current revision

NMR structure of Mini-B, an N-terminal- C-terminal construct from human Surfactant Protein B (SP-B), in Sodium dodecyl sulfate (SDS) micelles

PDB ID 2dwf

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools