1sfx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:28, 21 November 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1sfx.gif|left|200px]]
 
-
{{Structure
+
==X-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidus==
-
|PDB= 1sfx |SIZE=350|CAPTION= <scene name='initialview01'>1sfx</scene>, resolution 1.55&Aring;
+
<StructureSection load='1sfx' size='340' side='right'caption='[[1sfx]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene> and <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>
+
<table><tr><td colspan='2'>[[1sfx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SFX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SFX FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
|GENE= AF2008 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 Archaeoglobus fulgidus])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
}}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sfx OCA], [https://pdbe.org/1sfx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sfx RCSB], [https://www.ebi.ac.uk/pdbsum/1sfx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sfx ProSAT], [https://www.topsan.org/Proteins/MCSG/1sfx TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''X-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidus'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/O28271_ARCFU O28271_ARCFU]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1SFX is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SFX OCA].
+
Check<jmol>
-
[[Category: Archaeoglobus fulgidus]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sf/1sfx_consurf.spt"</scriptWhenChecked>
-
[[Category: Cymborowski, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Edwards, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Joachimiak, A.]]
+
</jmolCheckbox>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sfx ConSurf].
-
[[Category: Minor, W.]]
+
<div style="clear:both"></div>
-
[[Category: Osipiuk, J.]]
+
__TOC__
-
[[Category: Savchenko, A.]]
+
</StructureSection>
-
[[Category: Skarina, T.]]
+
[[Category: Archaeoglobus fulgidus DSM 4304]]
-
[[Category: CL]]
+
[[Category: Large Structures]]
-
[[Category: EDO]]
+
[[Category: Cymborowski M]]
-
[[Category: conserved hypothetical protein]]
+
[[Category: Edwards A]]
-
[[Category: hth motif]]
+
[[Category: Joachimiak A]]
-
[[Category: mcsg]]
+
[[Category: Minor W]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Osipiuk J]]
-
[[Category: protein structure initiative]]
+
[[Category: Savchenko A]]
-
[[Category: psi]]
+
[[Category: Skarina T]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:04:27 2008''
+

Current revision

X-ray crystal structure of putative HTH transcription regulator from Archaeoglobus fulgidus

PDB ID 1sfx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1sfx"
Personal tools