1ut2

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[[Image:1ut2.gif|left|200px]]<br />
 
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<applet load="1ut2" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1ut2, resolution 3.3&Aring;" />
 
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'''AFAE-3 ADHESIN FROM ESCHERICHIA COLI'''<br />
 
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==Overview==
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==AfaE-3 adhesin from Escherichia Coli==
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Pathogenic Escherichia coli expressing Afa/Dr adhesins are able to cause, both urinary tract and diarrheal infections. The Afa/Dr adhesins confer, adherence to epithelial cells via interactions with the human complement, regulating protein, decay accelerating factor (DAF or CD55). Two of the, Afa/Dr adhesions, AfaE-III and DraE, differ from each other by only three, residues but are reported to have several different properties. One such, difference is disruption of the interaction between DraE and CD55 by, chloramphenicol, whereas binding of AfaE-III to CD55 is unaffected. Here, we present a crystal structure of a strand-swapped trimer of wild type, DraE. We also present a crystal structure of this trimer in complex with, chloramphenicol, as well as NMR data supporting the binding position of, chloramphenicol within the crystal. The crystal structure reveals the, precise atomic basis for the sensitivity of DraE-CD55 binding to, chloramphenicol and demonstrates that in contrast to other, chloramphenicol-protein complexes, drug binding is mediated via, recognition of the chlorine "tail" rather than via intercalation of the, benzene rings into a hydrophobic pocket.
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<StructureSection load='1ut2' size='340' side='right'caption='[[1ut2]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1ut2]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UT2 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ut2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ut2 OCA], [https://pdbe.org/1ut2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ut2 RCSB], [https://www.ebi.ac.uk/pdbsum/1ut2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ut2 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/AFAE3_ECOLX AFAE3_ECOLX] Hemagglutinins of uropathogenic E.coli mediate adherence to the upper urinary tract. These adhesins bind to the Dr blood group antigen and also agglutinate human erythrocytes in the presence of D-mannose (mannose-resistant hemagglutination (MRHA)).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ut/1ut2_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ut2 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Pathogenic Escherichia coli expressing Afa/Dr adhesins are able to cause both urinary tract and diarrheal infections. The Afa/Dr adhesins confer adherence to epithelial cells via interactions with the human complement regulating protein, decay accelerating factor (DAF or CD55). Two of the Afa/Dr adhesions, AfaE-III and DraE, differ from each other by only three residues but are reported to have several different properties. One such difference is disruption of the interaction between DraE and CD55 by chloramphenicol, whereas binding of AfaE-III to CD55 is unaffected. Here we present a crystal structure of a strand-swapped trimer of wild type DraE. We also present a crystal structure of this trimer in complex with chloramphenicol, as well as NMR data supporting the binding position of chloramphenicol within the crystal. The crystal structure reveals the precise atomic basis for the sensitivity of DraE-CD55 binding to chloramphenicol and demonstrates that in contrast to other chloramphenicol-protein complexes, drug binding is mediated via recognition of the chlorine "tail" rather than via intercalation of the benzene rings into a hydrophobic pocket.
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==About this Structure==
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High resolution studies of the Afa/Dr adhesin DraE and its interaction with chloramphenicol.,Pettigrew D, Anderson KL, Billington J, Cota E, Simpson P, Urvil P, Rabuzin F, Roversi P, Nowicki B, du Merle L, Le Bouguenec C, Matthews S, Lea SM J Biol Chem. 2004 Nov 5;279(45):46851-7. Epub 2004 Aug 24. PMID:15331605<ref>PMID:15331605</ref>
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1UT2 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Structure known Active Site: AC1. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1UT2 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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High resolution studies of the Afa/Dr adhesin DraE and its interaction with chloramphenicol., Pettigrew D, Anderson KL, Billington J, Cota E, Simpson P, Urvil P, Rabuzin F, Roversi P, Nowicki B, du Merle L, Le Bouguenec C, Matthews S, Lea SM, J Biol Chem. 2004 Nov 5;279(45):46851-7. Epub 2004 Aug 24. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15331605 15331605]
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</div>
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<div class="pdbe-citations 1ut2" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Anderson, K.L.]]
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[[Category: Anderson KL]]
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[[Category: Barlow, P.]]
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[[Category: Barlow P]]
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[[Category: Billington, J.]]
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[[Category: Billington J]]
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[[Category: Bouguenec, C.Le.]]
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[[Category: Chen HA]]
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[[Category: Chen, H.A.]]
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[[Category: Cota E]]
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[[Category: Cota, E.]]
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[[Category: Dumerle L]]
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[[Category: Dumerle, L.]]
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[[Category: Le Bouguenec C]]
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[[Category: Lea, S.M.]]
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[[Category: Lea SM]]
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[[Category: Matthews, S.]]
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[[Category: Matthews S]]
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[[Category: Medof, E.]]
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[[Category: Medof E]]
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[[Category: Nowicki, B.]]
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[[Category: Nowicki B]]
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[[Category: Pettigrew, D.]]
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[[Category: Pettigrew D]]
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[[Category: Roversi, P.]]
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[[Category: Roversi P]]
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[[Category: Simpson, P.]]
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[[Category: Simpson P]]
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[[Category: Smith, R.A.G.]]
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[[Category: Smith RAG]]
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[[Category: Urvil, P.]]
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[[Category: Urvil P]]
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[[Category: SO4]]
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[[Category: afae-3]]
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[[Category: afimbrial adhesin]]
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[[Category: daec]]
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[[Category: upec]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 5 13:08:17 2007''
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Current revision

AfaE-3 adhesin from Escherichia Coli

PDB ID 1ut2

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