1vkd

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{{Seed}}
 
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[[Image:1vkd.png|left|200px]]
 
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==Crystal structure of a predicted glycosidase (tm1225) from thermotoga maritima msb8 at 2.10 A resolution==
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The line below this paragraph, containing "STRUCTURE_1vkd", creates the "Structure Box" on the page.
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<StructureSection load='1vkd' size='340' side='right'caption='[[1vkd]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1vkd]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VKD FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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{{STRUCTURE_1vkd| PDB=1vkd | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vkd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vkd OCA], [https://pdbe.org/1vkd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vkd RCSB], [https://www.ebi.ac.uk/pdbsum/1vkd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vkd ProSAT], [https://www.topsan.org/Proteins/JCSG/1vkd TOPSAN]</span></td></tr>
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</table>
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===Crystal structure of a predicted glycosylase (TM1225) from Thermotoga maritima at 2.10 A resolution===
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== Function ==
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[https://www.uniprot.org/uniprot/Q9X0V2_THEMA Q9X0V2_THEMA]
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== Evolutionary Conservation ==
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==About this Structure==
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[[Image:Consurf_key_small.gif|200px|right]]
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1VKD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima_msb8 Thermotoga maritima msb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VKD OCA].
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Check<jmol>
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[[Category: Single protein]]
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<jmolCheckbox>
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[[Category: Thermotoga maritima msb8]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vk/1vkd_consurf.spt"</scriptWhenChecked>
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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[[Category: Hypothetical protein]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Jcsg]]
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</jmolCheckbox>
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[[Category: Joint center for structural genomic]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vkd ConSurf].
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[[Category: Protein structure initiative]]
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<div style="clear:both"></div>
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[[Category: Psi]]
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__TOC__
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[[Category: Structural genomic]]
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</StructureSection>
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[[Category: Tm1225]]
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[[Category: Large Structures]]
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[[Category: Thermotoga maritima MSB8]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul 10 12:59:05 2008''
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Current revision

Crystal structure of a predicted glycosidase (tm1225) from thermotoga maritima msb8 at 2.10 A resolution

PDB ID 1vkd

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