1vpm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:36, 21 November 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1vpm.png|left|200px]]
 
-
<!--
+
==Crystal structure of Acyl-CoA hydrolase (NP_241664.1) from Bacillus halodurans at 1.66 A resolution==
-
The line below this paragraph, containing "STRUCTURE_1vpm", creates the "Structure Box" on the page.
+
<StructureSection load='1vpm' size='340' side='right'caption='[[1vpm]], [[Resolution|resolution]] 1.66&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1vpm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans_C-125 Alkalihalobacillus halodurans C-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VPM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VPM FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.66&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
{{STRUCTURE_1vpm| PDB=1vpm | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vpm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vpm OCA], [https://pdbe.org/1vpm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vpm RCSB], [https://www.ebi.ac.uk/pdbsum/1vpm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vpm ProSAT], [https://www.topsan.org/Proteins/JCSG/1vpm TOPSAN]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of Acyl-CoA hydrolase (NP_241664.1) from Bacillus halodurans at 1.66 A resolution===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9KEQ1_HALH5 Q9KEQ1_HALH5]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1VPM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VPM OCA].
+
Check<jmol>
-
[[Category: Bacteria]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vp/1vpm_consurf.spt"</scriptWhenChecked>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Acyl-coa hydrolase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Jcsg]]
+
</jmolCheckbox>
-
[[Category: Joint center for structural genomic]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vpm ConSurf].
-
[[Category: Np_241664 1]]
+
<div style="clear:both"></div>
-
[[Category: Protein structure initiative]]
+
__TOC__
-
[[Category: Psi]]
+
</StructureSection>
-
[[Category: Structural genomic]]
+
[[Category: Alkalihalobacillus halodurans C-125]]
-
 
+
[[Category: Large Structures]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 21:02:45 2008''
+

Current revision

Crystal structure of Acyl-CoA hydrolase (NP_241664.1) from Bacillus halodurans at 1.66 A resolution

PDB ID 1vpm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools