2ps3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="2ps3" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ps3, resolution 2.470&Aring;" /> '''Structure and metal...)
Current revision (01:19, 21 November 2024) (edit) (undo)
 
(18 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ps3.jpg|left|200px]]<br /><applet load="2ps3" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ps3, resolution 2.470&Aring;" />
 
-
'''Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli'''<br />
 
-
==About this Structure==
+
==Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli==
-
2PS3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2PS3 OCA].
+
<StructureSection load='2ps3' size='340' side='right'caption='[[2ps3]], [[Resolution|resolution]] 2.47&Aring;' scene=''>
-
[[Category: Escherichia coli]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2ps3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PS3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PS3 FirstGlance]. <br>
-
[[Category: Kim, L.R.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.47&#8491;</td></tr>
-
[[Category: Rosenzweig, A.C.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ps3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ps3 OCA], [https://pdbe.org/2ps3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ps3 RCSB], [https://www.ebi.ac.uk/pdbsum/2ps3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ps3 ProSAT]</span></td></tr>
-
[[Category: Vorontsov, I.I.]]
+
</table>
-
[[Category: Yatsunyk, L.A.]]
+
== Function ==
-
[[Category: the protein consists of two domains with a typical (beta/alfa)4 fold]]
+
[https://www.uniprot.org/uniprot/ZNUA_ECOLI ZNUA_ECOLI] Involved in the high-affinity zinc uptake transport system.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ps/2ps3_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ps3 ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
ZnuA is the periplasmic Zn(2+)-binding protein associated with the high-affinity ATP-binding cassette ZnuABC transporter from Escherichia coli. Although several structures of ZnuA and its homologs have been determined, details regarding metal ion stoichiometry, affinity, and specificity as well as the mechanism of metal uptake and transfer remain unclear. The crystal structures of E. coli ZnuA (Eco-ZnuA) in the apo, Zn(2+)-bound, and Co(2+)-bound forms have been determined. ZnZnuA binds at least two metal ions. The first, observed previously in other structures, is coordinated tetrahedrally by Glu59, His60, His143, and His207. Replacement of Zn(2+) with Co(2+) results in almost identical coordination geometry at this site. The second metal binding site involves His224 and several yet to be identified residues from the His-rich loop that is unique to Zn(2+) periplasmic metal binding receptors. Electron paramagnetic resonance and X-ray absorption spectroscopic data on CoZnuA provide additional insight into possible residues involved in this second site. The second site is also detected by metal analysis and circular dichroism (CD) titrations. Eco-ZnuA binds Zn(2+) (estimated K (d) &lt; 20 nM), Co(2+), Ni(2+), Cu(2+), Cu(+), and Cd(2+), but not Mn(2+). Finally, conformational changes upon metal binding observed in the crystal structures together with fluorescence and CD data indicate that only Zn(2+) substantially stabilizes ZnuA and might facilitate recognition of ZnuB and subsequent metal transfer.
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 13:38:41 2007''
+
Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli.,Yatsunyk LA, Easton JA, Kim LR, Sugarbaker SA, Bennett B, Breece RM, Vorontsov II, Tierney DL, Crowder MW, Rosenzweig AC J Biol Inorg Chem. 2008 Feb;13(2):271-88. Epub 2007 Nov 20. PMID:18027003<ref>PMID:18027003</ref>
 +
 
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 2ps3" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Escherichia coli]]
 +
[[Category: Large Structures]]
 +
[[Category: Kim LR]]
 +
[[Category: Rosenzweig AC]]
 +
[[Category: Vorontsov II]]
 +
[[Category: Yatsunyk LA]]

Current revision

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

PDB ID 2ps3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools