3clq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px <!-- The line below this paragraph, containing "STRUCTURE_3clq", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...)
Current revision (01:41, 21 November 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3clq.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of a conserved protein of unknown function from Enterococcus faecalis V583==
-
The line below this paragraph, containing "STRUCTURE_3clq", creates the "Structure Box" on the page.
+
<StructureSection load='3clq' size='340' side='right'caption='[[3clq]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3clq]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
{{STRUCTURE_3clq| PDB=3clq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clq OCA], [https://pdbe.org/3clq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clq RCSB], [https://www.ebi.ac.uk/pdbsum/3clq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clq ProSAT], [https://www.topsan.org/Proteins/MCSG/3clq TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of a conserved protein of unknown function from Enterococcus faecalis V583'''
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==About this Structure==
+
<jmolCheckbox>
-
3CLQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis_v583 Enterococcus faecalis v583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLQ OCA].
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clq_consurf.spt"</scriptWhenChecked>
-
[[Category: Enterococcus faecalis v583]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Clancy, S.]]
+
</jmolCheckbox>
-
[[Category: Duggan, E.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3clq ConSurf].
-
[[Category: Joachimiak, A.]]
+
<div style="clear:both"></div>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
__TOC__
-
[[Category: Tan, K.]]
+
</StructureSection>
-
[[Category: Apc29596 3]]
+
[[Category: Enterococcus faecalis V583]]
-
[[Category: Conserved protein of unknown function]]
+
[[Category: Large Structures]]
-
[[Category: Enterococcus faecalis v583]]
+
[[Category: Clancy S]]
-
[[Category: Mcsg]]
+
[[Category: Duggan E]]
-
[[Category: Midwest center for structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Protein structure initiative]]
+
[[Category: Tan K]]
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of a conserved protein of unknown function from Enterococcus faecalis V583

PDB ID 3clq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools