3nrl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (02:11, 21 November 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3nrl.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of protein RUMGNA_01417 from Ruminococcus gnavus, Northeast Structural Genomics Consortium Target UgR76==
-
The line below this paragraph, containing "STRUCTURE_3nrl", creates the "Structure Box" on the page.
+
<StructureSection load='3nrl' size='340' side='right'caption='[[3nrl]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3nrl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruminococcus_gnavus_ATCC_29149 Ruminococcus gnavus ATCC 29149]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NRL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NRL FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3nrl| PDB=3nrl | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nrl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nrl OCA], [https://pdbe.org/3nrl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nrl RCSB], [https://www.ebi.ac.uk/pdbsum/3nrl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nrl ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of protein RUMGNA_01417 from Ruminococcus gnavus, Northeast Structural Genomics Consortium Target UgR76===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A7B1J1_MEDG7 A7B1J1_MEDG7]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3NRL is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Ruminococcus_gnavus Ruminococcus gnavus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NRL OCA].
+
Check<jmol>
-
[[Category: Ruminococcus gnavus]]
+
<jmolCheckbox>
-
[[Category: Abashidze, M.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/3nrl_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Ciccosanti, C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Everett, J K.]]
+
</jmolCheckbox>
-
[[Category: Hunt, J F.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nrl ConSurf].
-
[[Category: Lee, D.]]
+
<div style="clear:both"></div>
-
[[Category: Montelione, G T.]]
+
__TOC__
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
</StructureSection>
-
[[Category: Nair, R.]]
+
[[Category: Large Structures]]
-
[[Category: Rost, B.]]
+
[[Category: Abashidze M]]
-
[[Category: Sahdev, S.]]
+
[[Category: Acton TB]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Tong, L.]]
+
[[Category: Everett JK]]
-
[[Category: Xiao, R.]]
+
[[Category: Hunt JF]]
-
[[Category: Beta protein]]
+
[[Category: Lee D]]
-
[[Category: Nesg]]
+
[[Category: Montelione GT]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Nair R]]
-
[[Category: Protein structure initiative]]
+
[[Category: Rost B]]
-
[[Category: Psi-2]]
+
[[Category: Sahdev S]]
-
[[Category: Structural genomic]]
+
[[Category: Seetharaman J]]
-
[[Category: Unknown function]]
+
[[Category: Tong L]]
-
 
+
[[Category: Xiao R]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 25 09:01:30 2010''
+

Current revision

Crystal Structure of protein RUMGNA_01417 from Ruminococcus gnavus, Northeast Structural Genomics Consortium Target UgR76

PDB ID 3nrl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3nrl"
Personal tools