5zz8

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m (Protected "5zz8" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 5zz8 is ON HOLD
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==Structure of the Herpes simplex virus type 2 C-capsid with capsid-vertex-specific component==
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<SX load='5zz8' size='340' side='right' viewer='molstar' caption='[[5zz8]], [[Resolution|resolution]] 3.75&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5zz8]] is a 51 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_alphaherpesvirus_2 Human alphaherpesvirus 2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZZ8 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.75&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zz8 OCA], [https://pdbe.org/5zz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zz8 RCSB], [https://www.ebi.ac.uk/pdbsum/5zz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zz8 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/G9I260_HHV2 G9I260_HHV2] Structural component of the T=16 icosahedral capsid. The capsid is composed of pentamers and hexamers of major capsid protein/MCP, which are linked together by heterotrimers called triplexes. These triplexes are formed by a single molecule of triplex protein 1/TRX1 and two copies of triplex protein 2/TRX2. Additionally, TRX1 is required for efficient transport of TRX2 to the nucleus, which is the site of capsid assembly.[HAMAP-Rule:MF_04018]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Herpes simplex viruses (HSVs) cause human oral and genital ulcer diseases. Patients with HSV-2 have a higher risk of acquiring a human immunodeficiency virus infection. HSV-2 is a member of the alpha-herpesvirinae subfamily that together with the beta- and gamma-herpesvirinae subfamilies forms the Herpesviridae family. Here, we report the cryo-electron microscopy structure of the HSV-2 C-capsid with capsid-vertex-specific component (CVSC) that was determined at 3.75 A using a block-based reconstruction strategy. We present atomic models of multiple conformers for the capsid proteins (VP5, VP23, VP19C, and VP26) and CVSC. Comparison of the HSV-2 homologs yields information about structural similarities and differences between the three herpesviruses sub-families and we identify alpha-herpesvirus-specific structural features. The hetero-pentameric CVSC, consisting of a UL17 monomer, a UL25 dimer and a UL36 dimer, is bound tightly by a five-helix bundle that forms extensive networks of subunit contacts with surrounding capsid proteins, which reinforce capsid stability.
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Authors: Wang, J.L., Yuan, S.
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Structure of the herpes simplex virus type 2 C-capsid with capsid-vertex-specific component.,Wang J, Yuan S, Zhu D, Tang H, Wang N, Chen W, Gao Q, Li Y, Wang J, Liu H, Zhang X, Rao Z, Wang X Nat Commun. 2018 Sep 10;9(1):3668. doi: 10.1038/s41467-018-06078-4. PMID:30201968<ref>PMID:30201968</ref>
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Description: structure of the Herpes simplex virus type 2 C-capsid with capsid-vertex-specific component
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Yuan, S]]
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<div class="pdbe-citations 5zz8" style="background-color:#fffaf0;"></div>
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[[Category: Wang, J.L]]
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Human alphaherpesvirus 2]]
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[[Category: Large Structures]]
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[[Category: Chen WY]]
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[[Category: Gao Q]]
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[[Category: Li YH]]
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[[Category: Liu HR]]
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[[Category: Rao ZH]]
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[[Category: Tang H]]
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[[Category: Wang JL]]
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[[Category: Wang JZ]]
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[[Category: Wang N]]
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[[Category: Wang XX]]
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[[Category: Yuan S]]
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[[Category: Zhang XZ]]
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[[Category: Zhu DJ]]

Current revision

Structure of the Herpes simplex virus type 2 C-capsid with capsid-vertex-specific component

5zz8, resolution 3.75Å

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