3lm7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:26, 27 November 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:3lm7.jpg|left|200px]]
 
-
<!--
+
==Crystal Structure of DUF1341 representative, from Yersinia enterocolitica subsp. enterocolitica 8081==
-
The line below this paragraph, containing "STRUCTURE_3lm7", creates the "Structure Box" on the page.
+
<StructureSection load='3lm7' size='340' side='right'caption='[[3lm7]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3lm7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_enterocolitica_subsp._enterocolitica_8081 Yersinia enterocolitica subsp. enterocolitica 8081]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LM7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LM7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_3lm7| PDB=3lm7 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lm7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lm7 OCA], [https://pdbe.org/3lm7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lm7 RCSB], [https://www.ebi.ac.uk/pdbsum/3lm7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lm7 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of DUF1341 representative, from Yersinia enterocolitica subsp. enterocolitica 8081===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A1JRF3_YERE8 A1JRF3_YERE8]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
3LM7 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Yersinia_enterocolitica Yersinia enterocolitica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LM7 OCA].
+
Check<jmol>
-
[[Category: Yersinia enterocolitica]]
+
<jmolCheckbox>
-
[[Category: Duke, N E.C.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lm/3lm7_consurf.spt"</scriptWhenChecked>
-
[[Category: Feldmann, B.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Joachimiak, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</jmolCheckbox>
-
[[Category: Wu, R.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lm7 ConSurf].
-
[[Category: Lyase]]
+
<div style="clear:both"></div>
-
[[Category: Mcsg]]
+
__TOC__
-
[[Category: Midwest center for structural genomic]]
+
</StructureSection>
-
[[Category: Protein structure initiative]]
+
[[Category: Large Structures]]
-
[[Category: Psi-2]]
+
[[Category: Yersinia enterocolitica subsp. enterocolitica 8081]]
-
[[Category: Putative 4-hydroxy-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase]]
+
[[Category: Duke NEC]]
-
[[Category: Structural genomic]]
+
[[Category: Feldmann B]]
-
 
+
[[Category: Joachimiak A]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 25 14:16:12 2010''
+
[[Category: Wu R]]

Current revision

Crystal Structure of DUF1341 representative, from Yersinia enterocolitica subsp. enterocolitica 8081

PDB ID 3lm7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools