4kyi

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==Legionella pneumophila effector==
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<StructureSection load='4kyi' size='340' side='right' caption='[[4kyi]], [[Resolution|resolution]] 3.08&Aring;' scene=''>
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==Crystal structure of the phospholipase VipD from Legionella pneumophila in complex with the human GTPase Rab5==
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<StructureSection load='4kyi' size='340' side='right'caption='[[4kyi]], [[Resolution|resolution]] 3.08&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4kyi]] is a 8 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KYI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KYI FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4kyi]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KYI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KYI FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.075&#8491;</td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kyi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kyi RCSB], [http://www.ebi.ac.uk/pdbsum/4kyi PDBsum]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC+ACID-GUANYLATE+ESTER'>GNP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<table>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kyi OCA], [https://pdbe.org/4kyi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kyi RCSB], [https://www.ebi.ac.uk/pdbsum/4kyi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kyi ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RAB5C_HUMAN RAB5C_HUMAN] Protein transport. Probably involved in vesicular traffic (By similarity).
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
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<div class="pdbe-citations 4kyi" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Fernandez-Recio, J.]]
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[[Category: Homo sapiens]]
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[[Category: Gaspar, A H.]]
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[[Category: Large Structures]]
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[[Category: Hierro, A.]]
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[[Category: Legionella pneumophila subsp. pneumophila str. Philadelphia 1]]
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[[Category: Lucas, M.]]
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[[Category: Fernandez-Recio J]]
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[[Category: Machner, M P.]]
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[[Category: Gaspar AH]]
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[[Category: Pallara, C.]]
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[[Category: Hierro A]]
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[[Category: Rojas, A L.]]
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[[Category: Lucas M]]
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[[Category: Phospholipase]]
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[[Category: Machner MP]]
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[[Category: Protein binding-transport protein complex]]
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[[Category: Pallara C]]
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[[Category: Rojas AL]]

Current revision

Crystal structure of the phospholipase VipD from Legionella pneumophila in complex with the human GTPase Rab5

PDB ID 4kyi

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