DNA polymerase 3D structures

**[[5wyp]], [[5wce]], [[6izo]], [[6jir]] - Dpo III beta subunit – ''Caulobacter crescentus''<br />

**[[1ig9]], [[1q9x]], [[1q9y]], [[2dy4]], [[2ozs]], [[2p5g]], [[3ndk]], [[3ne6]], [[3ngi]], [[3nhg]], [[3nae]], [[3lzj]], [[3lzi]], [[3qep]], [[3rma]], [[3rmb]], [[3rmc]], [[3rmd]], [[3rwu]], [[3s9h]], [[3scx]], [[3si6]], [[3sjj]], [[3snn]], [[3spy]], [[3spz]], [[3sq0]], [[3sq1]], [[3sq2]], [[3sq4]], [[3sun]], [[3suo]], [[3sup]], [[3suq]], [[3tab]], [[3tae]], [[3taf]], [[3tag]], [[4i9q]], [[4j2a]], [[4j2b]], [[4j2d]], [[4j2e]], [[4khn]], [[4khq]], [[4khs]], [[4khu]], [[4khw]], [[4khy]], [[4ki4]], [[4ki6]], [[4m3r]], [[4m3t]], [[4m3u]], [[4m3w]], [[4m3x]], [[4m3y]], [[4m3z]], [[4m41]], [[4m42]], [[4m45]], [[5gnq]] - EpDpo (mutant) + DNA + nucleotide<br />

**[[1zjm]], [[1tv9]], [[1tva]], [[1bpx]], [[1bpz]], [[1zqa]], [[1zqb]], [[1zqc]], [[1zqd]], [[1zqf]], [[1zqg]], [[1zqh]], [[1zqi]], [[1zaj]], [[1zqk]], [[1zql]], [[1zqm]], [[1zqn]], [[1zqo]], [[1zqp]], [[1zqq]], [[1zqr]], [[1zqs]], [[1zqt]], [[1zqu]], [[1zqv]], [[1zqw]], [[1zqx]], [[1zqy]], [[1zqz]], [[1zqe]], [[3q8p]], [[3q8q]], [[3lk9]], [[3mby]], [[3isb]], [[3isc]], [[3gdx]], [[3rh4]], [[3rh5]], [[3rh6]], [[4gxi]], [[4gxj]], [[4gxk]], [[4kld]], [[4kle]], [[4klf]], [[4klg]], [[4klh]], [[4kli]], [[4klj]], [[4kll]], [[4klm]], [[4klo]], [[4klp]], [[4klq]], [[4kls]], [[4klt]], [[4klu]], [[1zqj]], [[4lvs]], [[4m2y]], [[4m47]], [[4nlk]], [[4nln]], [[4nlz]], [[4nm1]], [[4nm2]], [[4pgy]], [[4tup]], [[4tuq]], [[4tur]], [[4tus]], [[5wo0]], [[5wnz]], [[5wny]], [[5wnx]], [[5vs4]], [[5vs3]], [[5vs2]], [[5vs1]], [[5vs0]], [[5vrz]], [[5vry]], [[5vrx]], [[5vrw]], [[5vez]], [[5v1r]], [[5v1p]], [[5v1o]], [[5v1n]], [[5v1j]], [[5v1i]], [[5v1h]], [[5v1g]], [[5v1f]], [[5ugp]], [[5ugo]], [[5ugn]], [[5u9h]], [[5u8i]], [[5u8h]], [[5u8g]], [[5u2t]], [[5u2s]], [[5u2r]], [[5tzv]], [[5tbc]], [[5tbb]], [[5tba]], [[5tb9]], [[5tb8]], [[5j2k]], [[5j2j]], [[5j2i]], [[5j2h]], [[5j2g]], [[5j2f]], [[5j2e]], [[5j2d]], [[5j2c]], [[5j2b]], [[5j2a]], [[5j29]], [[5j0y]], [[5j0x]], [[5j0w]], [[5j0u]], [[5j0t]], [[5j0s]], [[5j0r]], [[5j0q]], [[5j0p]], [[5j0o]], [[5dbc]], [[5dbb]], [[5dba]], [[5db9]], [[5db8]], [[5db7]], [[5db6]], [[6g2q]], [[6ph5]], [[7ice]], [[7icf]], [[7ici]], [[7icj]], [[7icl]], [[7icm]], [[7icp]], [[7icr]], [[7ict]], [[7icg]], [[7ich]], [[7icj]], [[7ick]], [[7icm]], [[7icn]], [[7ico]], [[7icp]], [[7icq]], [[7icr]], [[7ics]], [[7ict]], [[7icu]], [[7icv]], [[7k97]], [[8icb]], [[8icc]], [[8vf8]], [[8vf9]], [[8vfa]], [[8vfb]], [[8vfc]], [[8vfe]], [[8vff]], [[9vfg]], [[8vfi]], [[8vfj]], [[9icj]], [[9ick]], [[9icl]], [[9icm]], [[9icp]], [[9icw]], [[9icx]], [[9icy]] - hDpo beta + DNA<br />

**[[2p66]], [[4f5n]], [[6n2t]], [[6n2s]], [[6n2r]], [[6mr8]], [[6mr7]], [[6e3x]], [[6e3w]], [[6e3v]], [[6e3r]], [[6dia]], [[6cub]], [[6cua]], [[6cu9]], [[6ctx]], [[6ctw]], [[6ctv]], [[6ctu]], [[6ctt]], [[6ctr]],

[[6ctq]], [[6ctp]], [[6cto]], [[6ctn]], [[6ctm]], [[6ctl]], [[6ctk]], [[6ctj]], [[6cti]], [[6crh]], [[6crc]], [[6crb]], [[6cr9]], [[6cr8]], [[6cr7]], [[6cr6]], [[6cr5]], [[6cr4]], [[6cr3]], [[6cpq]], [[6cly]], [[6bem]], [[6bel]], [[6ph6]], [[6u2o]], [[6u6b]], [[6uok]], [[6uol]], [[6uom]], [[6w2m]], [[7k96]] - hDpo beta + DNA + nucleotide analog<br />

**[[3ikm]] - hDpo 1+2 <br />

**[[8v5d]] - hDpo1 – Cryo EM<br />

**[[3ikl]], [[2g4c]] - hDpo 2<br />

**[[2jw5]] - hDpo  BRCT domain<br />

**[[1xsl]] - hDpo  catalytic domain<br />

**[[1nzp]] - hDpo  lyase domain - NMR<br />

**[[3pmn]], [[3pnc]], [[3mda]], [[2gws]], [[2bcq]], [[2bcr]], [[2bcs]], [[2bcu]], [[2bcv]], [[1xsp]], [[1rzt]] - hDpo  + DNA<br />

**[[8g5i]], [[8g5j]], [[8g5l]], [[8g5m]], [[8g5n]], [[8g5o]], [[8g5s]], [[8t7e]], [[8udl]], [[8v54]], [[8v5r]] - hDpo  + DNA – Cryo EM<br />

**[[8v55]] - hDpo (mutant) + DNA – Cryo EM<br />

**[[3mgh]], [[3c5f]], [[3c5g]], [[2pfn]] - hDpo  (mutant) + DNA<br />

**[[8g5p]] - hDpo  + DNA + RNA – Cryo EM<br />

**[[3pml]], [[3mdc]], [[1xsn]], [[8udk]] - hDpo  + DNA + nucleotide<br />

**[[5c53]], [[5c52]], [[5c51]] - hDpo  + DNA + nucleotide + pyrimidine derivative<br />

**[[4ztz]], [[4ztu]] - hDpo  + DNA + nucleotide <br />

**[[8d33]], [[8d37]], [[8d3r]], [[8d42]], [[9ggf]] - hDpo  + DNA + nucleotide – Cryo EM<br />

**[[9ggb]], [[9ggc]], [[9ggd]], [[9gge]] - hDpo  (mutant) + DNA + nucleotide – Cryo EM<br />

**[[4k4g]], [[4k4h]], [[4k4i]] - hDpo  + DNA + nucleotide analog<br />

**[[3mgi]], [[3hw8]], [[3hwt]], [[3hx0]], [[2pfo]], [[2pfp]], [[2pfq]] - hDpo  (mutant) + DNA + nucleotide<br />

**[[8f69]] - mDpo 2 + DNA - mouse<br />

**[[3e0j]] - hDpo 2+3<br />

**[[6s1m]], [[6s1n]], [[6s1o]], [[6tny]] - hDpo δ subunits

catalytic+2+3+4 + PCNA + DNA + nucleotide analog – Cryo EM<br />

 

**[[5vbn]] - hDpo subunits A+2 <br />

**[[9f6i]], [[9f6j]], [[9f6l]] - hDpo subunit A + DNA – Cryo EM <br />

**[[9b8s]], [[9f6e]], [[9f6f]] - hDpo subunit A + DNA + PCNA – Cryo EM <br />

**[[9b8t]] - hDpo subunit A + DNA + PCNA + nucleotide – Cryo EM <br />

**[[3abd]], [[3abe]] - hDpo  catalytic subunit Rev3 + mitotic spindle assembly checkpoint protein Rev7<br />

**[[6ekm]], [[6bi7]], [[6bcd]], [[6bc8]] - hDpo  catalytic subunit + MAD2B<br />

**[[3vu7]], [[4gk0]], [[6ws0]] - hDpo  catalytic subunit + DNA repair protein Rev1 + MAD2B<br />

**[[6ws5]] - hDpo  catalytic subunit + DNA repair protein Rev1 + MAD2B + inhibitor<br />

**[[4fjo]], [[4gk5]] - hDpo  + hDpo  catalytic subunit + DNA repair protein Rev1 + MAD2B<br />

**[[6v8p]] - hDpo  catalytic subunit + hDpo d subunits 3+small – Cryo EM<br />

**[[6v93]] - hDpo  catalytic+processivity subunits + hDpo delta subunits 3+small + DNA + dCTP – Cryo EM<br />

**[[2i5o]] - hDpo  ubiquitin-binding zinc finger – NMR<br />

**[[3wup]] - hDpo  ubiquitin-binding zinc finger <br />

**[[9asj]], [[9ask]], [[9asl]], [[9bh6]], [[9bh7]] - hDpo  - Cryo EM <br />

**[[9bp9]], [[9bpa]] - hDpo  + inhibitor - Cryo EM <br />

**[[8ski]], [[8w0a]], [[9bh8]], [[9bh9]], [[9bha]], [[9c5q]] - hDpo  helicase domain + DNA - Cryo EM <br />

**[[3tq1]], [[4j9k]], [[4j9l]], [[4j9m]], [[4j9n]], [[4j9o]], [[4j9p]], [[4j9q]], [[4j9r]], [[4j9s]], [[6mp3]], [[8eve]], [[8evf]] - hDpo  + DNA <br />

**[[3jaa]], [[3mr2]], [[3mr3]], [[3mr5]], [[3mr6]], [[3si8]], [[4dl2]], [[4dl3]], [[4dl4]], [[4dl5]], [[4dl6]], [[4dl7]], [[4eey]], [[4ecq]], [[4ecr]], [[4ecs]], [[4ect]], [[4ecu]], [[4ecv]], [[4ecw]], [[4ecx]], [[4ecy]], [[4ecz]], [[4ed0]], [[4ed1]], [[4ed2]], [[4ed3]], [[4ed6]], [[4ed7]], [[4ed8]], [[4o3n]], [[4o3o]], [[4o3p]], [[4o3q]], [[4o3r]], [[4o3s]], [[4q8e]], [[4q8f]], [[4rnm]], [[4rnn]], [[4rno]], [[4x0p]], [[4x0q]], [[5l9x]], [[5l1l]], [[5l1k]], [[5l1j]], [[5l1i]], [[5kg7]], [[5kg6]], [[5kg5]], [[5kg4]], [[5kg3]], [[5kg2]], [[5kg1]], [[5kg0]], [[5kfz]], [[5kfy]], [[5kfx]], [[5kfw]], [[5kfv]], [[5kfu]], [[5kft]], [[5kfs]], [[5kfr]], [[5kfq]], [[5kfp]], [[5kfo]], [[5kfn]], [[5kfm]], [[5kfl]], [[5kfk]], [[5kfj]], [[5kfi]], [[5kfh]], [[5kfg]], [[5kff]], [[5kfe]], [[5kfd]], [[5kfc]], [[5kfb]], [[5kfa]], [[5jum]], [[5f9n]], [[5f9l]], [[5ewg]], [[5ewf]], [[5ewe]], [[5dqi]], [[5dqh]], [[5dqg]], [[5dlg]], [[5dlf]], [[5dgb]], [[5dga]], [[5dg9]], [[5dg8]], [[5dg7]], [[4yr3]], [[4yr2]], [[4yr0]], [[4yqw]], [[4yp3]], [[4ru9]], [[6mxo]], [[6m7v]], [[6m7u]], [[6m7t]], [[6m7p]], [[6m7o]], [[6d0z]], [[6d0m]], [[6mq8]], [[6pl7]], [[6pl8]], [[6plc]], [[6ui2]], [[6uqi]], [[6v5k]], [[6w5x]], [[6wk6]], [[7l69]], [[7lcd]], [[7m7l]], [[7m7m]], [[7m7n]], [[7m7o]], [[7m7p]], [[7m7q]], [[7m7r]], [[7m7s]], [[7m7t]], [[7m7u]], [[7m7y]], [[7m7z]], [[7m80]], [[7m81]], [[7m82]], [[7m83]], [[7m84]], [[7m85]], [[7m86]], [[7m87]], [[7m88]], [[7m89]], [[7m8a]], [[7m8b]], [[7m8c]], [[7m8d]], [[7u72]], [[7u73]], [[7u74]], [[7u75]], [[7u76]], [[7u77]], [[7u78]], [[7u79]], [[7u7a]], [[7u7b]], [[7u7c]], [[7u7d]], [[7u7e]], [[7u7g]], [[7u7f]], [[7u7i]], [[7u7j]], [[7u7k]], [[7u7l]], [[7u7r]], [[7u7s]], [[7u7t]], [[7u7u]], [[7u7v]], [[7u7w]], [[7u7x]], [[7u7y]], [[7u7z]], [[7u80]], [[7u81]], [[7u82]], [[7u83]], [[7u84]], [[8e85]], [[8e86]], [[8e87]], [[8e88]], [[8e89]], [[8e8a]], [[8e8c]], [[8e8d]], [[8e8e]], [[8e8f]], [[8e8g]], [[8e8h]], [[8e8j]], [[8e8k]], [[8fn3]], [[8fog]], [[8foh]], [[8foj]], [[8g8h]], [[8g8j]], [[8gbf]], [[8gkr]], [[8gml]], [[8ujt]], [[8ujv]], [[8ujx]], [[8uk4]], [[8v7a]], [[8v7b]], [[8v7c]], [[8v7d]], [[8v7e]], [[8v7f]], [[8v7g]], [[8v7h]], [[8v7j]], [[8v7k]], [[8v7i]], [[9chw]], [[9ci9]], [[9cih]], [[9ciq]] - hDpo  + DNA + nucleotide<br />

**[[9au5]], [[9au8]], [[9au9]] - hDpo  + DNA + nucleotide – Cryo EM<br />

**[[6pz3]], [[6q02]] - hDpo  (mutant) + DNA + nucleotide<br />

**[[6xbu]], [[7zus]] – hDpo polymerase domain + nucleotide + DNA<br />

**[[5a9f]], [[5aga]] - hDpo  + nucleotide<br />

**[[8ef9]], [[8efc]], [[8efk]] – Dpo polymerase domain + nucleotide + DNA – Lates calcarifer<br />

**[[3q8r]], [[3q8s]], [[3h4b]], [[3h4d]], [[3gv5]], [[3gv7]], [[3gv8]], [[3epg]], [[3epi]], [[2fll]], [[2fln]], [[2flp]], [[2dpi]], [[2dpj]], [[2alz]], [[1zet]], [[1t3n]], [[4ebc]], [[4ebd]], [[4ebe]], [[4fs1]], [[4fs2]], [[4eyh]], [[4eyi]], [[3g6v]], [[3g6x]], [[3g6y]], [[5ulx]], [[5ulw]], [[5kt7]], [[5kt6]], [[5kt5]], [[5kt4]], [[5kt3]], [[5kt2]] - hDpo  + DNA + nucleotide<br />

**[[3ngd]], [[3osn]], [[3h40]] - hDpo  catalytic fragment + DNA <br />

**[[2ktf]] - hDpo  + ubiquitin<br />

**[[2l0f]], [[2l0g]] - hDpo + ubiquitin – NMR<br />

**[[2khu]] - hDpo ubiquitin binding motif – NMR<br />

**[[2khw]] - hDpo ubiquitin binding motif + ubiquitin – NMR<br />

**[[2kwu]], [[2kwv]] - mDpo  C-terminal + ubiquitin - NMR<br />

**[[3ai4]] - mDpo /yEGFP<br />

**[[1t94]] - hDpo <br />

**[[3in5]], [[5w2c]], [[5w2a]], [[5t14]] - hDpo  + DNA<br />

**[[2w7o]], [[2w7p]], [[2oh2]], [[3pzp]], [[4u6p]], [[6cst]], [[6bs1]], [[6brx]], [[5w2a]], [[5w2c]] - hDpo  + DNA + nucleotide<br />

**[[7nv0]], [[7nv1]] - hDpo  + PCNA + DNA + nucleotide<br />

**[[4u7c]], [[4y6p]] - hDpo  + DNA + benzopyrene derivative<br />

**[[2lsi]] - hDpo  peptide + hRev1<br />

**[[2lsk]] - mDpo  + DNA repair protein Rev1<br />

**[[2htf]], [[2dun]] - hDpo  BRCT domain residues 24-143 – NMR<br />

**[[4lzd]] - hDpo  residues 132-494 <br />

**[[4lzg]], [[5tyz]], [[5tyy]], [[5tyx]], [[5tyw]], [[5tyv]], [[5tyu]], [[5tyg]], [[5tyf]], [[5tye]], [[5tyd]], [[5tyc]], [[5tyb]], [[5txz]], [[5txx]], [[5tws]], [[5twr]], [[5twq]], [[5twp]], [[5zlc]] - hDpo  residues 132-494 + DNA <br />

**[[4yd2]], [[4ycx]] - hDpo  residues 132-494 (mutant) + DNA <br />

**[[6ak5]] - hDpo  residues 132-397+411-494 + nucleotide derivative<br />

**[[6ipn]], [[6ipm]], [[6ipl]], [[6ipk]], [[6ipj]], [[6ipi]], [[6iph]], [[6aec]], [[6aeh]], [[6ak6]] - hDpo  residues 132-397+411-494 (mutant) + nucleotide derivative<br />

**[[6vez]], [[6vf0]], [[6vf1]], [[6vf2]], [[6vf3]], [[6vf4]], [[6vf5]], [[6vf6]], [[6vf7]], [[6vf8]], [[6vf9]], [[6vfa]], [[6vfb]], [[6vfc]], [[7co6]], [[7co8]], [[7co9]], [[7coa]], [[7cob]], [[7cod]], [[7kss]], [[7kst]], [[7ksu]], [[7ksv]], [[7ksw]], [[7ksx]], [[7ksy]], [[7ksz]], [[7kt0]], [[7kt1]], [[7kt2]], [[7kt3]], [[7kt4]], [[7kt5]], [[7kt6]], [[7kt7]], [[7kt9]], [[7kta]], [[7ktb]], [[7ktc]], [[7ktd]], [[7kte]], [[7ktf]], [[7ktg]], [[7kth]], [[7kti]], [[7ktj]], [[7ktk]], [[7ktl]], [[7ktm]], [[7ktn]] - hDpo  + DNA + nucleotide derivative<br />

**[[4m04]], [[4m0a]], [[4yd1]], [[6ipg]], [[6ipf]], [[6ipe]], [[6ipd]], [[5vz7]], [[5vz8]], [[5vz9]], [[5vza]], [[5vzb]], [[5vzc]], [[5vzd]], [[5vze]], [[5vzf]], [[5vzg]], [[5vzh]], [[5vzi]], [[6ak8]], [[6ak9]], [[6akh]], [[6p1m]], [[6p1n]], [[6p1o]], [[6p1p]], [[6p1q]], [[6p1r]], [[6p1s]], [[6p1t]], [[6p1u]], [[6p1v]], [[6p1w]], [[7coc]] - hDpo  residues 132-494+411-494 (mutant) + DNA + nucleotide derivative<br />

**[[2ihm]] - mDpo  catalytic domain + DNA <br />

**[[3oiq]] - yDpo  + cell division control protein 13 <br />

**[[3flo]], [[3lgb]] - yDpo  subunits A,B<br />

**[[8foc]], [[8fod]], [[8foe]] - yDpo  subunits A,B + primase small+large subunits – Cryo EM<br />

**[[8fok]] - yDpo  subunits A,B + primase small+large subunits + DNA – Cryo EM<br />

**[[4b08]], [[4fvm]] - yDpo  subunit A<br />

**[[4fxd]], [[4fyd]] - yDpo  subunit A + RNA + DNA<br />

**[[5oki]] - yDpo  subunit A + DCC1 + chromosome fidelity protein<br />

**[[3iay]] - yDpo  catalytic subunit + DNA<br />

**[[6p1h]] - yDpo  catalytic+small+3 subunits + DNA + nucleotide – Cryo EM<br />

**[[6wjv]] - yDpo II  – Cryo EM<br />

**[[6hv8]] - yDpo II  subunit A+B – Cryo EM<br />

**[[8xgc]] - yDpo II  in replication origin complex – Cryo EM<br />

**[[3oha]], [[3ohb]], [[3mfh]] - yDpo  (mutant) + DNA<br />

**[[6i8a]], [[6qib]], [[7r3x]], [[7r3y]] - yDpo II  subunit A + DNA + nucleotide <br />

**[[6g0a]], [[6fwk]], [[3mfi]], [[4m8o]] - yDpo II  subunit A (mutant) + DNA + nucleotide derivative<br />

**[[6s1c]], [[6s2e]], [[6s2f]] - yDpo II  subunit A (mutant) + DCC1 + chromosome transmission fidelity proteins<br />

**[[6hv9]] - yDpo II  subunit A+B + CMG + DNA + nucleotide – Cryo EM<br />

**[[2r8j]], [[2r8k]], [[4ptf]] - yDpo  catalytic domain + DNA + nucleotide <br />

**[[6h1v]], [[8b67]], [[8b6k]], [[8b77]], [[8b79]] - yDpo  catalytic domain (mutant) + DNA + nucleotide <br />

**[[2xgp]], [[2xgq]], [[2wtf]] - yDpo  + DNA<br />

**[[9b8r]] - yDpo  + DNA – Cryo EM<br />

**[[7lxd]] - yDpo  catalytic+processivity subunits + hDpo delta subunits 3+small – Cryo EM<br />

**[[7s0t]] - yDpo  catalytic+processivity subunits + hDpo delta subunits 3+small + DNA – Cryo EM<br />

**[[8tlq]] - yDpo  catalytic+processivity subunits + hDpo delta subunit 3 + DNA + dCTP – Cryo EM<br />

**[[5y27]], [[5y26]] - Dpo subunit D + transcription factor – fission yeast<br />

**[[1jih]], [[5vtp]] – yDpo  catalytic domain<br />

Terminal deoxynucleotidyl transferase binary complex