3b6c

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[[Image:3b6c.jpg|left|200px]]
[[Image:3b6c.jpg|left|200px]]
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{{Structure
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|PDB= 3b6c |SIZE=350|CAPTION= <scene name='initialview01'>3b6c</scene>, resolution 2.30&Aring;
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The line below this paragraph, containing "STRUCTURE_3b6c", creates the "Structure Box" on the page.
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|SITE= <scene name='pdbsite=AC1:Sdn+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Sdn+Binding+Site+For+Residue+A+302'>AC2</scene> and <scene name='pdbsite=AC3:Sdn+Binding+Site+For+Residue+B+303'>AC3</scene>
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|LIGAND= <scene name='pdbligand=SDN:[(3S)-9-HYDROXY-1-METHYL-10-OXO-4,10-DIHYDRO-3H-BENZO[G]ISOCHROMEN-3-YL]ACETIC+ACID'>SDN</scene>
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|ACTIVITY=
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|GENE= actII ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1902 Streptomyces coelicolor])
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|DOMAIN=
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{{STRUCTURE_3b6c| PDB=3b6c | SCENE= }}
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|RELATEDENTRY=[[2opt|2OPT]], [[3b6a|3B6A]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3b6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b6c OCA], [http://www.ebi.ac.uk/pdbsum/3b6c PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3b6c RCSB]</span>
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'''Crystal structure of the Streptomyces coelicolor TetR family protein ActR in complex with (S)-DNPA'''
'''Crystal structure of the Streptomyces coelicolor TetR family protein ActR in complex with (S)-DNPA'''
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[[Category: Junop, M S.]]
[[Category: Junop, M S.]]
[[Category: Willems, A R.]]
[[Category: Willems, A R.]]
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[[Category: (s)-dnpa]]
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[[Category: Actinorhodin]]
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[[Category: actinorhodin]]
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[[Category: Dna-binding protein]]
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[[Category: dna-binding protein]]
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[[Category: Ligand]]
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[[Category: ligand]]
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[[Category: Tetr family]]
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[[Category: tetr family]]
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[[Category: Transcription regulation]]
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[[Category: transcription regulation]]
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[[Category: Transcriptional repressor]]
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[[Category: transcriptional repressor]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 20:25:56 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:23:25 2008''
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Revision as of 17:25, 4 May 2008

Template:STRUCTURE 3b6c

Crystal structure of the Streptomyces coelicolor TetR family protein ActR in complex with (S)-DNPA


Overview

Actinorhodin, an antibiotic produced by Streptomyces coelicolor, is exported from the cell by the ActA efflux pump. actA is divergently transcribed from actR, which encodes a TetR-like transcriptional repressor. We showed previously that ActR represses transcription by binding to an operator from the actA/actR intergenic region. Importantly, actinorhodin itself or various actinorhodin biosynthetic intermediates can cause ActR to dissociate from its operator, leading to derepression. This suggests that ActR may mediate timely self-resistance to an endogenously produced antibiotic by responding to one of its biosynthetic precursors. Here, we report the structural basis for this precursor-mediated derepression with crystal structures of homodimeric ActR by itself and in complex with either actinorhodin or the actinorhodin biosynthetic intermediate (S)-DNPA [4-dihydro-9-hydroxy-1-methyl-10-oxo-3-H-naphtho-[2,3-c]-pyran-3-(S)-aceti c acid]. The ligand-binding tunnel in each ActR monomer has a striking hydrophilic/hydrophobic/hydrophilic arrangement of surface residues that accommodate either one hexacyclic actinorhodin molecule or two back-to-back tricyclic (S)-DNPA molecules. Moreover, our work also reveals the strongest structural evidence to date that TetR-mediated antibiotic resistance may have been acquired from an antibiotic-producer organism.

About this Structure

3B6C is a Single protein structure of sequence from Streptomyces coelicolor. Full crystallographic information is available from OCA.

Reference

Crystal structures of the Streptomyces coelicolor TetR-like protein ActR alone and in complex with actinorhodin or the actinorhodin biosynthetic precursor (S)-DNPA., Willems AR, Tahlan K, Taguchi T, Zhang K, Lee ZZ, Ichinose K, Junop MS, Nodwell JR, J Mol Biol. 2008 Mar 7;376(5):1377-87. Epub 2008 Jan 4. PMID:18207163 Page seeded by OCA on Sun May 4 20:25:56 2008

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