This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3c5y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:3c5y.jpg|left|200px]]
[[Image:3c5y.jpg|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 3c5y |SIZE=350|CAPTION= <scene name='initialview01'>3c5y</scene>, resolution 1.810&Aring;
+
The line below this paragraph, containing "STRUCTURE_3c5y", creates the "Structure Box" on the page.
-
|SITE= <scene name='pdbsite=AC1:No3+Binding+Site+For+Residue+F+213'>AC1</scene>, <scene name='pdbsite=AC2:No3+Binding+Site+For+Residue+F+214'>AC2</scene>, <scene name='pdbsite=AC3:No3+Binding+Site+For+Residue+I+213'>AC3</scene>, <scene name='pdbsite=AC4:No3+Binding+Site+For+Residue+G+213'>AC4</scene>, <scene name='pdbsite=AC5:No3+Binding+Site+For+Residue+G+214'>AC5</scene>, <scene name='pdbsite=AC6:No3+Binding+Site+For+Residue+F+215'>AC6</scene>, <scene name='pdbsite=AC7:No3+Binding+Site+For+Residue+F+216'>AC7</scene>, <scene name='pdbsite=AC8:No3+Binding+Site+For+Residue+P+213'>AC8</scene>, <scene name='pdbsite=AC9:Edo+Binding+Site+For+Residue+H+213'>AC9</scene>, <scene name='pdbsite=BC1:Edo+Binding+Site+For+Residue+B+213'>BC1</scene>, <scene name='pdbsite=BC2:Edo+Binding+Site+For+Residue+K+213'>BC2</scene>, <scene name='pdbsite=BC3:Edo+Binding+Site+For+Residue+G+215'>BC3</scene>, <scene name='pdbsite=BC4:Edo+Binding+Site+For+Residue+E+213'>BC4</scene>, <scene name='pdbsite=BC5:Edo+Binding+Site+For+Residue+I+214'>BC5</scene>, <scene name='pdbsite=BC6:Edo+Binding+Site+For+Residue+L+213'>BC6</scene>, <scene name='pdbsite=BC7:Edo+Binding+Site+For+Residue+J+213'>BC7</scene>, <scene name='pdbsite=BC8:Edo+Binding+Site+For+Residue+N+213'>BC8</scene>, <scene name='pdbsite=BC9:Edo+Binding+Site+For+Residue+A+213'>BC9</scene>, <scene name='pdbsite=CC1:Edo+Binding+Site+For+Residue+E+214'>CC1</scene>, <scene name='pdbsite=CC2:Edo+Binding+Site+For+Residue+G+216'>CC2</scene>, <scene name='pdbsite=CC3:Edo+Binding+Site+For+Residue+F+217'>CC3</scene>, <scene name='pdbsite=CC4:Edo+Binding+Site+For+Residue+F+218'>CC4</scene>, <scene name='pdbsite=CC5:Edo+Binding+Site+For+Residue+C+213'>CC5</scene>, <scene name='pdbsite=CC6:Edo+Binding+Site+For+Residue+M+213'>CC6</scene>, <scene name='pdbsite=CC7:Edo+Binding+Site+For+Residue+D+213'>CC7</scene>, <scene name='pdbsite=CC8:Edo+Binding+Site+For+Residue+B+214'>CC8</scene>, <scene name='pdbsite=CC9:Edo+Binding+Site+For+Residue+B+215'>CC9</scene>, <scene name='pdbsite=DC1:Edo+Binding+Site+For+Residue+A+214'>DC1</scene>, <scene name='pdbsite=DC2:Edo+Binding+Site+For+Residue+B+216'>DC2</scene>, <scene name='pdbsite=DC3:Edo+Binding+Site+For+Residue+B+217'>DC3</scene>, <scene name='pdbsite=DC4:Edo+Binding+Site+For+Residue+P+214'>DC4</scene>, <scene name='pdbsite=DC5:Edo+Binding+Site+For+Residue+E+215'>DC5</scene>, <scene name='pdbsite=DC6:Edo+Binding+Site+For+Residue+I+215'>DC6</scene>, <scene name='pdbsite=DC7:Edo+Binding+Site+For+Residue+J+214'>DC7</scene>, <scene name='pdbsite=DC8:Edo+Binding+Site+For+Residue+A+215'>DC8</scene>, <scene name='pdbsite=DC9:Edo+Binding+Site+For+Residue+G+217'>DC9</scene>, <scene name='pdbsite=EC1:Edo+Binding+Site+For+Residue+H+214'>EC1</scene>, <scene name='pdbsite=EC2:Edo+Binding+Site+For+Residue+H+215'>EC2</scene>, <scene name='pdbsite=EC3:Edo+Binding+Site+For+Residue+K+214'>EC3</scene>, <scene name='pdbsite=EC4:Edo+Binding+Site+For+Residue+G+218'>EC4</scene>, <scene name='pdbsite=EC5:Edo+Binding+Site+For+Residue+G+219'>EC5</scene>, <scene name='pdbsite=EC6:Edo+Binding+Site+For+Residue+H+216'>EC6</scene>, <scene name='pdbsite=EC7:Edo+Binding+Site+For+Residue+A+216'>EC7</scene>, <scene name='pdbsite=EC8:Edo+Binding+Site+For+Residue+D+214'>EC8</scene>, <scene name='pdbsite=EC9:Edo+Binding+Site+For+Residue+K+215'>EC9</scene>, <scene name='pdbsite=FC1:Edo+Binding+Site+For+Residue+H+217'>FC1</scene>, <scene name='pdbsite=FC2:Edo+Binding+Site+For+Residue+M+214'>FC2</scene>, <scene name='pdbsite=FC3:Edo+Binding+Site+For+Residue+I+216'>FC3</scene>, <scene name='pdbsite=FC4:Edo+Binding+Site+For+Residue+A+217'>FC4</scene>, <scene name='pdbsite=FC5:Edo+Binding+Site+For+Residue+M+215'>FC5</scene>, <scene name='pdbsite=FC6:Edo+Binding+Site+For+Residue+I+217'>FC6</scene>, <scene name='pdbsite=FC7:Edo+Binding+Site+For+Residue+A+218'>FC7</scene>, <scene name='pdbsite=FC8:Edo+Binding+Site+For+Residue+G+220'>FC8</scene>, <scene name='pdbsite=FC9:Edo+Binding+Site+For+Residue+F+219'>FC9</scene>, <scene name='pdbsite=GC1:Edo+Binding+Site+For+Residue+N+214'>GC1</scene>, <scene name='pdbsite=GC2:Edo+Binding+Site+For+Residue+J+215'>GC2</scene>, <scene name='pdbsite=GC3:Edo+Binding+Site+For+Residue+F+220'>GC3</scene>, <scene name='pdbsite=GC4:Edo+Binding+Site+For+Residue+E+216'>GC4</scene>, <scene name='pdbsite=GC5:Edo+Binding+Site+For+Residue+H+218'>GC5</scene>, <scene name='pdbsite=GC6:Edo+Binding+Site+For+Residue+A+219'>GC6</scene>, <scene name='pdbsite=GC7:Edo+Binding+Site+For+Residue+M+216'>GC7</scene>, <scene name='pdbsite=GC8:Edo+Binding+Site+For+Residue+A+220'>GC8</scene>, <scene name='pdbsite=GC9:Edo+Binding+Site+For+Residue+F+221'>GC9</scene>, <scene name='pdbsite=HC1:Edo+Binding+Site+For+Residue+C+214'>HC1</scene>, <scene name='pdbsite=HC2:Edo+Binding+Site+For+Residue+F+222'>HC2</scene>, <scene name='pdbsite=HC3:Edo+Binding+Site+For+Residue+N+215'>HC3</scene>, <scene name='pdbsite=HC4:Edo+Binding+Site+For+Residue+E+217'>HC4</scene>, <scene name='pdbsite=HC5:Edo+Binding+Site+For+Residue+G+221'>HC5</scene> and <scene name='pdbsite=HC6:Edo+Binding+Site+For+Residue+B+218'>HC6</scene>
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CSW:CYSTEINE-S-DIOXIDE'>CSW</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= YP_001165900.1, Saro_3514 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279238 Novosphingobium aromaticivorans DSM 12444])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_3c5y| PDB=3c5y | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5y OCA], [http://www.ebi.ac.uk/pdbsum/3c5y PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c5y RCSB]</span>
+
-
}}
+
'''Crystal structure of putative ribose 5-phosphate isomerase (YP_001165900.1) from Novosphingobium aromaticivorans DSM 12444 at 1.81 A resolution'''
'''Crystal structure of putative ribose 5-phosphate isomerase (YP_001165900.1) from Novosphingobium aromaticivorans DSM 12444 at 1.81 A resolution'''
Line 20: Line 17:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: JCSG, Joint Center for Structural Genomics.]]
[[Category: JCSG, Joint Center for Structural Genomics.]]
-
[[Category: jcsg]]
+
[[Category: Jcsg]]
-
[[Category: joint center for structural genomic]]
+
[[Category: Joint center for structural genomic]]
-
[[Category: plasmid]]
+
[[Category: Plasmid]]
-
[[Category: protein structure initiative]]
+
[[Category: Protein structure initiative]]
-
[[Category: psi-2]]
+
[[Category: Psi-2]]
-
[[Category: putative ribose 5-phosphate isomerase]]
+
[[Category: Putative ribose 5-phosphate isomerase]]
-
[[Category: structural genomic]]
+
[[Category: Structural genomic]]
-
[[Category: unknown function]]
+
[[Category: Unknown function]]
-
[[Category: yp_001165900 1]]
+
[[Category: Yp_001165900 1]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 21:23:46 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:30:50 2008''
+

Revision as of 18:23, 4 May 2008

Template:STRUCTURE 3c5y

Crystal structure of putative ribose 5-phosphate isomerase (YP_001165900.1) from Novosphingobium aromaticivorans DSM 12444 at 1.81 A resolution


About this Structure

3C5Y is a Single protein structure of sequence from Novosphingobium aromaticivorans dsm 12444. Full crystallographic information is available from OCA. Page seeded by OCA on Sun May 4 21:23:46 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools