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1jkp

From Proteopedia

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[[Image:1jkp.gif|left|200px]]
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{{Seed}}
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[[Image:1jkp.png|left|200px]]
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{{STRUCTURE_1jkp| PDB=1jkp | SCENE= }}
{{STRUCTURE_1jkp| PDB=1jkp | SCENE= }}
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'''Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations'''
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===Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations===
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==Overview==
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The Hin recombinase specifically recognizes its DNA-binding site by means of both major and minor groove interactions. A previous X-ray structure, together with new structures of the Hin DNA-binding domain bound to a recombination half-site that were solved as part of the present study, have revealed that two ordered water molecules are present within the major groove interface. In this report, we test the importance of these waters directly by X-ray crystal structure analysis of complexes with four mutant DNA sequences. These structures, combined with their Hin-binding properties, provide strong support for the critical importance of one of the intermediate waters. A lesser but demonstrable role is ascribed to the second water molecule. The mutant structures also illustrate the prominent roles of thymine methyls both in stabilizing intermediate waters and in interfering with water or amino acid side chain interactions with DNA.
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The line below this paragraph, {{ABSTRACT_PUBMED_11847127}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 11847127 is the PubMed ID number.
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{{ABSTRACT_PUBMED_11847127}}
==About this Structure==
==About this Structure==
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[[Category: T11g mutant]]
[[Category: T11g mutant]]
[[Category: Water-mediated recognition]]
[[Category: Water-mediated recognition]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 21:20:24 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 20:23:33 2008''

Revision as of 17:23, 1 July 2008

Image:1jkp.png

Template:STRUCTURE 1jkp

Testing the Water-Mediated HIN Recombinase DNA Recognition by Systematic Mutations

Template:ABSTRACT PUBMED 11847127

About this Structure

1JKP is a Single protein structure. Full crystallographic information is available from OCA.

Reference

Testing water-mediated DNA recognition by the Hin recombinase., Chiu TK, Sohn C, Dickerson RE, Johnson RC, EMBO J. 2002 Feb 15;21(4):801-14. PMID:11847127

Page seeded by OCA on Tue Jul 1 20:23:33 2008

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