This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1m8q
From Proteopedia
(Difference between revisions)
m (Protected "Template:STRUCTURE 1m8q" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | {{ | + | {{StructureD |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1m8q (<scene name='initialview01'>initial scene</scene>) | + | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1m8q (<scene name='initialview01'>initial scene</scene>)}}} |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00012 ACTIN], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00022 Actin], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01377 MYSc_type_II], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02736 Myosin_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00051 EFh], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5126 FRQ1]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00012 ACTIN], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00022 Actin], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01377 MYSc_type_II], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02736 Myosin_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00051 EFh], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG5126 FRQ1]</span> | ||
|RELATEDENTRY=[[2mys|2mys]], [[1atn|1atn]] | |RELATEDENTRY=[[2mys|2mys]], [[1atn|1atn]] | ||
| + | |NONSTDRES=<scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m8q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m8q OCA], [http://www.ebi.ac.uk/pdbsum/1m8q PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1m8q RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m8q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m8q OCA], [http://www.ebi.ac.uk/pdbsum/1m8q PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1m8q RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0005198 | text = structural molecule activity}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0005516 | text = calmodulin binding}}{{GO|id=GO:0003774 | text = motor activity}}{{GO|id=GO:0003779 | text = actin binding}}{{GO|id=GO:0005509 | text = calcium ion binding}} | ||
| + | |PROCESS={{GO|id=GO:0048741 | text = skeletal muscle fiber development}}{{GO|id=GO:0030240 | text = muscle thin filament assembly}}{{GO|id=GO:0006941 | text = striated muscle contraction}} | ||
| + | |COMPONENT={{GO|id=GO:0005884 | text = actin filament}}{{GO|id=GO:0005856 | text = cytoskeleton}}{{GO|id=GO:0005865 | text = striated muscle thin filament}}{{GO|id=GO:0001725 | text = stress fiber}}{{GO|id=GO:0005737 | text = cytoplasm}}{{GO|id=GO:0005863 | text = striated muscle thick filament}}{{GO|id=GO:0016459 | text = myosin complex}} | ||
| + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004000 Ipr004000], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004001 Ipr004001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004009 Ipr004009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002928 Ipr002928], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001609 Ipr001609], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000048 Ipr000048], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015650 Ipr015650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002048 Ipr002048], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011992 Ipr011992]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00022 PF00022], [http://pfam.sanger.ac.uk/family?acc=PF00612 PF00612], [http://pfam.sanger.ac.uk/family?acc=PF02736 PF02736], [http://pfam.sanger.ac.uk/family?acc=PF00063 PF00063], [http://pfam.sanger.ac.uk/family?acc=PF00036 PF00036]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78795 d1m8qa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78801 d1m8qg_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78796 d1m8qb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78802 d1m8qh_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78797 d1m8qc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78803 d1m8qi_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78792 d1m8q7_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78791 d1m8q5_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78790 d1m8q4_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78789 d1m8q3_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78788 d1m8q2_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78787 d1m8q1_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78786 d1m8q0_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78811 d1m8qz_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78810 d1m8qy_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78809 d1m8qx_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78808 d1m8qw_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78807 d1m8qv_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78794 d1m8q9_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78793 d1m8q8_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78806 d1m8qr_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78800 d1m8qf_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78805 d1m8qq_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78799 d1m8qe_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78804 d1m8qp_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=78798 d1m8qd_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P68135 P68135], [http://ca.expasy.org/cgi-bin/niceprot.pl?P13538 P13538], [http://ca.expasy.org/cgi-bin/niceprot.pl?P02609 P02609], [http://ca.expasy.org/cgi-bin/niceprot.pl?P02604 P02604]</span> | ||
}} | }} | ||
