This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ma5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1ma5.jpg|left|200px]]
+
{{Seed}}
 +
[[Image:1ma5.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1ma5| PDB=1ma5 | SCENE= }}
{{STRUCTURE_1ma5| PDB=1ma5 | SCENE= }}
-
'''Tachyplesin I solution structure in the presence of 300mM Dodecylphosphocholine micelles'''
+
===Tachyplesin I solution structure in the presence of 300mM Dodecylphosphocholine micelles===
-
==Overview==
+
<!--
-
Tachyplesin I is a 17-residue peptide isolated from the horseshoe crab, Tachypleus tridentatus.It has high antimicrobial activity and adopts a beta-hairpin conformation in solution stabilized by two cross-strand disulfide bonds. We report an NMR structural investigation of wild-type tachyplesin I and three linear derivatives (denoted TPY4, TPF4, and TPA4 in which the bridging cysteine residues are uniformly replaced with tyrosine, phenylalanine, and alanine, respectively). The three-dimensional aqueous solution structures of the wild type and the active variant TPY4 reveal very similar beta-hairpin conformations. In contrast, the inactive variant TPA4 is unstructured in solution. The arrangement of the tyrosine side chains in the TPY4 structure suggests that the beta-hairpin is stabilized by aromatic ring stacking interactions. This is supported by experiments in which the beta-hairpin structure of TPF4 is disrupted by the addition of phenol, but not by the addition of an equimolar amount of cyclohexanol. We have also determined the structures of wild-type tachyplesin I and TPY4 in the presence of dodecylphosphocholine micelles. Both peptides undergo significant conformational rearrangement upon micelle association. Analysis of the micelle-associated peptide structures shows an increased level of exposure of specific hydrophobic side chains and an increased hydrophobic integy moment. Comparison of the structures in micelle and aqueous solution for both wild-type tachyplesin I and TPY4 reveals two requirements for high antimicrobial activity: a beta-hairpin fold in solution and the ability to rearrange critical side chain residues upon membrane association.
+
The line below this paragraph, {{ABSTRACT_PUBMED_12369825}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 12369825 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_12369825}}
==About this Structure==
==About this Structure==
-
1MA5 is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MA5 OCA].
+
1MA5 is a [[Single protein]] structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MA5 OCA].
==Reference==
==Reference==
Line 28: Line 32:
[[Category: Dodecylphosphocholine]]
[[Category: Dodecylphosphocholine]]
[[Category: Tachyplesin i]]
[[Category: Tachyplesin i]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 00:48:57 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 2 23:32:16 2008''

Revision as of 20:32, 2 July 2008

Image:1ma5.png

Template:STRUCTURE 1ma5

Tachyplesin I solution structure in the presence of 300mM Dodecylphosphocholine micelles

Template:ABSTRACT PUBMED 12369825

About this Structure

1MA5 is a Single protein structure. Full experimental information is available from OCA.

Reference

Solution and micelle-bound structures of tachyplesin I and its active aromatic linear derivatives., Laederach A, Andreotti AH, Fulton DB, Biochemistry. 2002 Oct 15;41(41):12359-68. PMID:12369825

Page seeded by OCA on Wed Jul 2 23:32:16 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ma5"
Personal tools