This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ygs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:3ygs.gif|left|200px]]
+
{{Seed}}
 +
[[Image:3ygs.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_3ygs| PDB=3ygs | SCENE= }}
{{STRUCTURE_3ygs| PDB=3ygs | SCENE= }}
-
'''APAF-1 CARD IN COMPLEX WITH PRODOMAIN OF PROCASPASE-9'''
+
===APAF-1 CARD IN COMPLEX WITH PRODOMAIN OF PROCASPASE-9===
-
==Overview==
+
<!--
-
Caspase-9-mediated apoptosis (programmed cell death) plays a central role in the development and homeostasis of all multicellular organisms. Mature caspase-9 is derived from its procaspase precursor as a result of recruitment by the activating factor Apaf-1. The crystal structures of the caspase-recruitment domain of Apaf-1 by itself and in complex with the prodomain of procaspase-9 have been determined at 1.6 and 2.5 A resolution, respectively. These structures and other evidence reveal that each molecule of Apaf-1 interacts with a molecule of procaspase-9 through two highly charged and complementary surfaces formed by non-conserved residues; these surfaces determine recognition specificity through networks of intermolecular hydrogen bonds and van der Waals interactions. Mutation of the important interface residues in procaspase-9 or Apaf-1 prevents or reduces activation of procaspase-9 in a cell-free system. Wild-type, but not mutant, prodomains of caspase-9 completely inhibit catalytic processing of procaspase-9. Furthermore, analysis of homologues from Caenorhabditis elegans indicates that recruitment of CED-3 by CED-4 is probably mediated by the same set of conserved structural motifs, with a corresponding change in the specificity-determining residues.
+
The line below this paragraph, {{ABSTRACT_PUBMED_10376594}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 10376594 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_10376594}}
==About this Structure==
==About this Structure==
Line 32: Line 36:
[[Category: Caspase recruitment]]
[[Category: Caspase recruitment]]
[[Category: Recognition complex]]
[[Category: Recognition complex]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 22:15:41 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Jul 3 13:13:30 2008''

Revision as of 10:13, 3 July 2008

Template:STRUCTURE 3ygs

APAF-1 CARD IN COMPLEX WITH PRODOMAIN OF PROCASPASE-9

Template:ABSTRACT PUBMED 10376594

About this Structure

3YGS is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Structural basis of procaspase-9 recruitment by the apoptotic protease-activating factor 1., Qin H, Srinivasula SM, Wu G, Fernandes-Alnemri T, Alnemri ES, Shi Y, Nature. 1999 Jun 10;399(6736):549-57. PMID:10376594

Page seeded by OCA on Thu Jul 3 13:13:30 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools