This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2p2d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2p2d.gif|left|200px]]
+
{{Seed}}
 +
[[Image:2p2d.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_2p2d| PDB=2p2d | SCENE= }}
{{STRUCTURE_2p2d| PDB=2p2d | SCENE= }}
-
'''Crystal Structure and Allosteric Regulation of the Cytoplasmic Escherichia coli L-Asparaginase I'''
+
===Crystal Structure and Allosteric Regulation of the Cytoplasmic Escherichia coli L-Asparaginase I===
-
==Overview==
+
<!--
-
AnsA is the cytoplasmic asparaginase from Escherichia coli involved in intracellular asparagine utilization. Analytical ultracentifugation and X-ray crystallography reveal that AnsA forms a tetrameric structure as a dimer of two intimate dimers. Kinetic analysis of the enzyme reveals that AnsA is positively cooperative, displaying a sigmoidal substrate dependence curve with an [S](0.5) of 1 mM L-asparagine and a Hill coefficient (n(H)) of 2.6. Binding of L-asparagine to an allosteric site was observed in the crystal structure concomitant with a reorganization of the quarternary structure, relative to the apo enzyme. The carboxyl group of the bound asparagine makes salt bridges and hydrogen bonds to Arg240, while the N(delta2) nitrogen interacts with Thr162. Mutation of Arg240 to Ala increases the [S](0.5) value to 5.9 mM, presumably by reducing the affinity of the site for L-asparagine, although the enzyme retains cooperativity. Mutation of Thr162 to Ala results in an active enzyme with no cooperativity. Transmission of the signal from the allosteric site to the active site appears to involve subtle interactions at the dimer-dimer interface and relocation of Gln118 into the vicinity of the active site to position the probable catalytic water molecule. These data define the structural basis for the cooperative regulation of the intracellular asparaginase that is required for proper functioning within the cell.
+
The line below this paragraph, {{ABSTRACT_PUBMED_17451745}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 17451745 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_17451745}}
==About this Structure==
==About this Structure==
Line 29: Line 33:
[[Category: Yun, M K.]]
[[Category: Yun, M K.]]
[[Category: Asparaginase]]
[[Category: Asparaginase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 12:11:43 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 15:01:10 2008''

Revision as of 12:01, 28 July 2008

Image:2p2d.png

Template:STRUCTURE 2p2d

Crystal Structure and Allosteric Regulation of the Cytoplasmic Escherichia coli L-Asparaginase I

Template:ABSTRACT PUBMED 17451745

About this Structure

2P2D is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Crystal structure and allosteric regulation of the cytoplasmic Escherichia coli L-asparaginase I., Yun MK, Nourse A, White SW, Rock CO, Heath RJ, J Mol Biol. 2007 Jun 8;369(3):794-811. Epub 2007 Mar 30. PMID:17451745

Page seeded by OCA on Mon Jul 28 15:01:10 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2p2d"
Personal tools