This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hza

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2hza.gif|left|200px]]
+
{{Seed}}
 +
[[Image:2hza.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_2hza| PDB=2hza | SCENE= }}
{{STRUCTURE_2hza| PDB=2hza | SCENE= }}
-
'''Nickel-bound full-length Escherichia coli NikR'''
+
===Nickel-bound full-length Escherichia coli NikR===
-
==Overview==
+
<!--
-
Metal ion homeostasis is critical to the survival of all cells. Regulation of nickel concentrations in Escherichia coli is mediated by the NikR repressor via nickel-induced transcriptional repression of the nickel ABC-type transporter, NikABCDE. Here, we report two crystal structures of nickel-activated E. coli NikR, the isolated repressor at 2.1 A resolution and in a complex with its operator DNA sequence from the nik promoter at 3.1 A resolution. Along with the previously published structure of apo-NikR, these structures allow us to evaluate functional proposals for how metal ions activate NikR, delineate the drastic conformational changes required for operator recognition, and describe the formation of a second metal-binding site in the presence of DNA. They also provide a rare set of structural views of a ligand-responsive transcription factor in the unbound, ligand-induced, and DNA-bound states, establishing a model system for the study of ligand-mediated effects on transcription factor function.
+
The line below this paragraph, {{ABSTRACT_PUBMED_16945905}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 16945905 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_16945905}}
==About this Structure==
==About this Structure==
Line 27: Line 31:
[[Category: Ribbon-helix-helix]]
[[Category: Ribbon-helix-helix]]
[[Category: Transcription factor]]
[[Category: Transcription factor]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 06:53:37 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 02:57:54 2008''

Revision as of 23:57, 28 July 2008

Template:STRUCTURE 2hza

Nickel-bound full-length Escherichia coli NikR

Template:ABSTRACT PUBMED 16945905

About this Structure

2HZA is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

NikR-operator complex structure and the mechanism of repressor activation by metal ions., Schreiter ER, Wang SC, Zamble DB, Drennan CL, Proc Natl Acad Sci U S A. 2006 Sep 12;103(37):13676-81. Epub 2006 Aug 31. PMID:16945905

Page seeded by OCA on Tue Jul 29 02:57:54 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools