This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3d0a
From Proteopedia
| Line 1: | Line 1: | ||
| - | + | {{Seed}} | |
| + | [[Image:3d0a.jpg|left|200px]] | ||
| - | The | + | <!-- |
| + | The line below this paragraph, containing "STRUCTURE_3d0a", creates the "Structure Box" on the page. | ||
| + | You may change the PDB parameter (which sets the PDB file loaded into the applet) | ||
| + | or the SCENE parameter (which sets the initial scene displayed when the page is loaded), | ||
| + | or leave the SCENE parameter empty for the default display. | ||
| + | --> | ||
| + | {{STRUCTURE_3d0a| PDB=3d0a | SCENE= }} | ||
| - | + | ===Human p53 core domain with hot spot mutation R249S and second site suppressor mutation H168R in sequence-specific complex with DNA=== | |
| - | Description: p53 (6) | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed | + | <!-- |
| + | The line below this paragraph, {{ABSTRACT_PUBMED_18996393}}, adds the Publication Abstract to the page | ||
| + | (as it appears on PubMed at http://www.pubmed.gov), where 18996393 is the PubMed ID number. | ||
| + | --> | ||
| + | {{ABSTRACT_PUBMED_18996393}} | ||
| + | |||
| + | ==Disease== | ||
| + | Known disease associated with this structure: Adrenal cortical carcinoma OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Breast cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Colorectal cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Hepatocellular carcinoma OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Histiocytoma OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Li-Fraumeni syndrome OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Multiple malignancy syndrome OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Nasopharyngeal carcinoma OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Osteosarcoma OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Pancreatic cancer OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]], Thyroid carcinoma OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=191170 191170]] | ||
| + | |||
| + | ==About this Structure== | ||
| + | 3D0A is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D0A OCA]. | ||
| + | |||
| + | ==Reference== | ||
| + | <ref group="xtra">PMID:18996393</ref><references group="xtra"/> | ||
| + | [[Category: Homo sapiens]] | ||
| + | [[Category: Rozenberg, H.]] | ||
| + | [[Category: Shakked, Z.]] | ||
| + | [[Category: Suad, O.]] | ||
| + | [[Category: Acetylation]] | ||
| + | [[Category: Activator]] | ||
| + | [[Category: Alternative splicing]] | ||
| + | [[Category: Anti-oncogene]] | ||
| + | [[Category: Apoptosis]] | ||
| + | [[Category: Cell cycle]] | ||
| + | [[Category: Covalent protein-rna linkage]] | ||
| + | [[Category: Cytoplasm]] | ||
| + | [[Category: Disease mutation]] | ||
| + | [[Category: Dna target]] | ||
| + | [[Category: Dna-binding]] | ||
| + | [[Category: Endoplasmic reticulum]] | ||
| + | [[Category: Glycoprotein]] | ||
| + | [[Category: Host-virus interaction]] | ||
| + | [[Category: Li-fraumeni syndrome]] | ||
| + | [[Category: Loop-sheet-helix motif]] | ||
| + | [[Category: Metal-binding]] | ||
| + | [[Category: Methylation]] | ||
| + | [[Category: Mutant protein]] | ||
| + | [[Category: Nucleus]] | ||
| + | [[Category: P53]] | ||
| + | [[Category: Phosphoprotein]] | ||
| + | [[Category: Polymorphism]] | ||
| + | [[Category: Transcription]] | ||
| + | [[Category: Transcription regulation]] | ||
| + | [[Category: Transcription/dna complex]] | ||
| + | [[Category: Ubl conjugation]] | ||
| + | [[Category: Zinc]] | ||
| + | |||
| + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 21 10:44:44 2009'' | ||
Revision as of 08:44, 21 January 2009
Contents |
Human p53 core domain with hot spot mutation R249S and second site suppressor mutation H168R in sequence-specific complex with DNA
Template:ABSTRACT PUBMED 18996393
Disease
Known disease associated with this structure: Adrenal cortical carcinoma OMIM:[191170], Breast cancer OMIM:[191170], Colorectal cancer OMIM:[191170], Hepatocellular carcinoma OMIM:[191170], Histiocytoma OMIM:[191170], Li-Fraumeni syndrome OMIM:[191170], Multiple malignancy syndrome OMIM:[191170], Nasopharyngeal carcinoma OMIM:[191170], Osteosarcoma OMIM:[191170], Pancreatic cancer OMIM:[191170], Thyroid carcinoma OMIM:[191170]
About this Structure
3D0A is a 8 chains structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.
Reference
- Suad O, Rozenberg H, Brosh R, Diskin-Posner Y, Kessler N, Shimon LJ, Frolow F, Liran A, Rotter V, Shakked Z. Structural basis of restoring sequence-specific DNA binding and transactivation to mutant p53 by suppressor mutations. J Mol Biol. 2009 Jan 9;385(1):249-65. Epub 2008 Oct 30. PMID:18996393 doi:10.1016/j.jmb.2008.10.063
Page seeded by OCA on Wed Jan 21 10:44:44 2009
Categories: Homo sapiens | Rozenberg, H. | Shakked, Z. | Suad, O. | Acetylation | Activator | Alternative splicing | Anti-oncogene | Apoptosis | Cell cycle | Covalent protein-rna linkage | Cytoplasm | Disease mutation | Dna target | Dna-binding | Endoplasmic reticulum | Glycoprotein | Host-virus interaction | Li-fraumeni syndrome | Loop-sheet-helix motif | Metal-binding | Methylation | Mutant protein | Nucleus | P53 | Phosphoprotein | Polymorphism | Transcription | Transcription regulation | Transcription/dna complex | Ubl conjugation | Zinc
