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Template:StructureTest
From Proteopedia
(Difference between revisions)
(New page: {{#if: {{{CONSURF|}}} | {{StructureCS|CONSURF={{{CONSURF|}}}}}|}}) |
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| - | {{#if: {{{ | + | {{Structure |
| + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| + | |SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene> | ||
| + | |LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | ||
| + | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span> | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0046914 | text = transition metal ion binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0008199 | text = ferric iron binding}} | ||
| + | |PROCESS={{GO|id=GO:0006879 | text = cellular iron ion homeostasis}}{{GO|id=GO:0006950 | text = response to stress}} | ||
| + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009078 Ipr009078], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012347 Ipr012347], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002177 Ipr002177], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008331 Ipr008331]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00210 PF00210]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P37960 P37960]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script>if (consurf_A!=1); select:A; spacefill off;color translucent -1; consurf_A = 1; javascript "document.getElementById('jmb_A').value='A [ ]'"; else; select:A; spacefill on; color opaque;consurf_A = 0;javascript "document.getElementById('jmb_A').value='A [x]';"; endif;</script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_A</name> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script>if (consurf_B!=1); select:B; spacefill off;color translucent -1; consurf_B = 1;javascript "document.getElementById('jmb_B').value='B [ ]'"; else; select:B; spacefill on; color opaque;consurf_B = 0;javascript "document.getElementById('jmb_B').value='B [x]';"; endif;</script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_B</name> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script>if (consurf_C!=1); select:C; spacefill off;color translucent -1; consurf_C = 1;javascript "document.getElementById('jmb_C').value='C [ ]'"; else; select:C; spacefill on; color opaque;consurf_C = 0;javascript "document.getElementById('jmb_C').value='C [ ]';"; endif;</script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_C</name> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script>if (consurf_D!=1); select:D; spacefill off;color translucent -1; consurf_D = 1;javascript "document.getElementById('jmb_D').value='D [ ]'"; else; select:D; spacefill on; color opaque;consurf_D = 0;javascript "document.getElementById('jmb_D').value='D [x]';"; endif;</script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_D</name> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | }} | ||
| + | |||
| + | {{Structure | ||
| + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| + | |SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene> | ||
| + | |LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | ||
| + | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span> | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0046914 | text = transition metal ion binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0008199 | text = ferric iron binding}} | ||
| + | |PROCESS={{GO|id=GO:0006879 | text = cellular iron ion homeostasis}}{{GO|id=GO:0006950 | text = response to stress}} | ||
| + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009078 Ipr009078], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012347 Ipr012347], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002177 Ipr002177], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008331 Ipr008331]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00210 PF00210]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P37960 P37960]</span> | ||
| + | }} | ||
| + | |||
| + | {{Structure | ||
| + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| + | |SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene> | ||
| + | |LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | ||
| + | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span> | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span> | ||
| + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009078 Ipr009078], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012347 Ipr012347], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002177 Ipr002177], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008331 Ipr008331]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00210 PF00210]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P37960 P37960]</span> | ||
| + | }} | ||
| + | |||
| + | {{Structure | ||
| + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| + | |SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene> | ||
| + | |LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | ||
| + | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span> | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0046914 | text = transition metal ion binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0008199 | text = ferric iron binding}} | ||
| + | |PROCESS={{GO|id=GO:0006879 | text = cellular iron ion homeostasis}}{{GO|id=GO:0006950 | text = response to stress}} | ||
| + | }} | ||
| + | |||
| + | {{Structure | ||
| + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2chp]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| + | |SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Chain+B'>AC1</scene> | ||
| + | |LIGAND= <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | ||
| + | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01043 DPS]</span> | ||
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2chp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2chp OCA], [http://www.ebi.ac.uk/pdbsum/2chp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2chp RCSB]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script>if (consurf_A!=1); select:A; spacefill off;color translucent -1; consurf_A = 1; javascript "document.getElementById('jmb_A').value='A [ ]'"; else; select:A; spacefill on; color opaque;consurf_A = 0;javascript "document.getElementById('jmb_A').value='A [x]';"; endif;</script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_A</name> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script>if (consurf_B!=1); select:B; spacefill off;color translucent -1; consurf_B = 1;javascript "document.getElementById('jmb_B').value='B [ ]'"; else; select:B; spacefill on; color opaque;consurf_B = 0;javascript "document.getElementById('jmb_B').value='B [x]';"; endif;</script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_B</name> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script>if (consurf_C!=1); select:C; spacefill off;color translucent -1; consurf_C = 1;javascript "document.getElementById('jmb_C').value='C [ ]'"; else; select:C; spacefill on; color opaque;consurf_C = 0;javascript "document.getElementById('jmb_C').value='C [ ]';"; endif;</script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_C</name> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script>if (consurf_D!=1); select:D; spacefill off;color translucent -1; consurf_D = 1;javascript "document.getElementById('jmb_D').value='D [ ]'"; else; select:D; spacefill on; color opaque;consurf_D = 0;javascript "document.getElementById('jmb_D').value='D [x]';"; endif;</script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_D</name> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | }} | ||
Revision as of 13:50, 1 February 2009
| |||||||||
| 2chp, resolution 2.00Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Sites: | |||||||||
| Ligands: | |||||||||
| Domains: | DPS | ||||||||
| |||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
| |||||||
| 2chp, resolution 2.00Å () | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | |||||||
| Ligands: | |||||||
| Domains: | DPS | ||||||
| |||||||
| |||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
| |||||||
| 2chp, resolution 2.00Å () | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | |||||||
| Ligands: | |||||||
| Domains: | DPS | ||||||
| |||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
| |||||||
| 2chp, resolution 2.00Å () | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | |||||||
| Ligands: | |||||||
| Domains: | DPS | ||||||
| |||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
| |||||||||
| 2chp, resolution 2.00Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Sites: | |||||||||
| Ligands: | |||||||||
| Domains: | DPS | ||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

