This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1c1z
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1c1z, resolution 2.87Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1c1z]], resolution 2.87Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=MAN:SUGAR+(ALPHA-D-MANNOSE)'>MAN</scene>, <scene name='pdbligand=NDG:SUGAR+(N-ACETYL-D-GLUCOSAMINE)'>NDG</scene> | |LIGAND= <scene name='pdbligand=MAN:SUGAR+(ALPHA-D-MANNOSE)'>MAN</scene>, <scene name='pdbligand=NDG:SUGAR+(N-ACETYL-D-GLUCOSAMINE)'>NDG</scene> | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00033 CCP], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00084 Sushi], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09014 Sushi_2]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00033 CCP], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00084 Sushi], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09014 Sushi_2]</span> | ||
| Line 11: | Line 11: | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA03 1C1Za03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA05 1C1Za05], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA04 1C1Za04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA02 1C1Za02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA01 1C1Za01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015104 Ipr015104], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00084 PF00084], [http://pfam.sanger.ac.uk/family?acc=PF09014 PF09014]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44869 d1c1za2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44871 d1c1za4], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44872 d1c1za5], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44870 d1c1za3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44868 d1c1za1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02749 P02749]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA03 1C1Za03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA05 1C1Za05], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA04 1C1Za04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA02 1C1Za02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1c1zA01 1C1Za01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015104 Ipr015104], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00084 PF00084], [http://pfam.sanger.ac.uk/family?acc=PF09014 PF09014]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44869 d1c1za2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44871 d1c1za4], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44872 d1c1za5], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44870 d1c1za3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44868 d1c1za1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02749 P02749]</span> | ||
|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=APOH APOH]</span> | |FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=APOH APOH]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1c1z_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 09:02, 17 February 2009
| |||||||||||
| 1c1z, resolution 2.87Å () | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , | ||||||||||
| Non-Standard Residues: | , | ||||||||||
| Domains: | CCP, Sushi, Sushi_2 | ||||||||||
| Related: | 1vvc, 1ckl, 1hfh, 1qub | ||||||||||
| |||||||||||
| |||||||||||
| |||||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||||

