Template:STRUCTURE 1h6v

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Revision as of 14:24, 17 February 2009

1h6v, resolution 3.00Å ()

Sites:

, , , , , , , , , , and

Ligands:

Non-Standard Residues:

Activity:

Thioredoxin-disulfide reductase, with EC number 1.8.1.9

Domains:

PRK06116, Pyr_redox, Pyr_redox_dim

Structural annotation:

Resources:

CATH : 1H6Va03, 1H6Va01, 1H6Va02, 1H6Vb03, 1H6Vb01, 1H6Vb02, 1H6Vc01, 1H6Vc02, 1H6Vc03, 1H6Vd01, 1H6Vd02, 1H6Vd03, 1H6Ve01, 1H6Ve02, 1H6Ve03, 1H6Vf01, 1H6Vf02, 1H6Vf03
InterPro : Ipr004099, Ipr012999, Ipr001100, Ipr006338, Ipr013027, Ipr001327, Ipr000815
Pfam : PF02852, PF00070, PF07992
SCOP : d1h6va1, d1h6va3, d1h6va2, d1h6vb1, d1h6vb2, d1h6vb3, d1h6vc3, d1h6vc1, d1h6vc2, d1h6vd1, d1h6vd2, d1h6vd3, d1h6ve1, d1h6ve3, d1h6ve2, d1h6vf1, d1h6vf3, d1h6vf2
UniProt : O89049

Functional annotation:
Cellular component:	cytosol cytoplasm
Biological process:	cell proliferation electron transport response to oxidative stress hydrogen peroxide catabolic process cell redox homeostasis thioredoxin pathway
Molecular function:	NADP binding FAD binding thioredoxin-disulfide reductase activity oxidoreductase activity selenium binding oxidoreductase activity, acting on NADH or NADPH, disulfide as acceptor

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1h6v"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1h6v, resolution 3.00&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1h6v]], resolution 3.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |SITE= <scene name='pdbsite=FAA:Fad+Binding+Site+For+Chain+A'>FAA</scene>, <scene name='pdbsite=FAB:Fad+Binding+Site+For+Chain+B'>FAB</scene>, <scene name='pdbsite=FAC:Fad+Binding+Site+For+Chain+C'>FAC</scene>, <scene name='pdbsite=FAD:Fad+Binding+Site+For+Chain+D'>FAD</scene>, <scene name='pdbsite=FAE:Fad+Binding+Site+For+Chain+E'>FAE</scene>, <scene name='pdbsite=FAF:Fad+Binding+Site+For+Chain+F'>FAF</scene>, <scene name='pdbsite=NDA:Ndp+Binding+Site+For+Chain+A'>NDA</scene>, <scene name='pdbsite=NDB:Ndp+Binding+Site+For+Chain+B'>NDB</scene>, <scene name='pdbsite=NDC:Ndp+Binding+Site+For+Chain+C'>NDC</scene>, <scene name='pdbsite=NDD:Ndp+Binding+Site+For+Chain+D'>NDD</scene>, <scene name='pdbsite=NDE:Ndp+Binding+Site+For+Chain+E'>NDE</scene> and <scene name='pdbsite=NDF:Ndp+Binding+Site+For+Chain+F'>NDF</scene>
 |LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene>
@@ Line 11: / Line 11: @@
 |COMPONENT={{GO|id=GO:0005829 | text = cytosol}}{{GO|id=GO:0005737 | text = cytoplasm}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vA03 1H6Va03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vA01 1H6Va01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vA02 1H6Va02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vB03 1H6Vb03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vB01 1H6Vb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vB02 1H6Vb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vC01 1H6Vc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vC02 1H6Vc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vC03 1H6Vc03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vD01 1H6Vd01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vD02 1H6Vd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vD03 1H6Vd03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vE01 1H6Ve01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vE02 1H6Ve02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vE03 1H6Ve03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vF01 1H6Vf01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vF02 1H6Vf02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h6vF03 1H6Vf03]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004099 Ipr004099], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012999 Ipr012999], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001100 Ipr001100], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006338 Ipr006338], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013027 Ipr013027], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001327 Ipr001327], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000815 Ipr000815]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02852 PF02852], [http://pfam.sanger.ac.uk/family?acc=PF00070 PF00070], [http://pfam.sanger.ac.uk/family?acc=PF07992 PF07992]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60693 d1h6va1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60695 d1h6va3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60694 d1h6va2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60696 d1h6vb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60697 d1h6vb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60698 d1h6vb3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60701 d1h6vc3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60699 d1h6vc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60700 d1h6vc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60702 d1h6vd1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60703 d1h6vd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60704 d1h6vd3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60705 d1h6ve1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60707 d1h6ve3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60706 d1h6ve2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60708 d1h6vf1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60710 d1h6vf3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=60709 d1h6vf2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O89049 O89049]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1h6v_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1h6v_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>C [x]</text>
+<name>jmb_1h6v_C</name>
+<title>toggle chain C</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>D [x]</text>
+<name>jmb_1h6v_D</name>
+<title>toggle chain D</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>E [x]</text>
+<name>jmb_1h6v_E</name>
+<title>toggle chain E</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>F [x]</text>
+<name>jmb_1h6v_F</name>
+<title>toggle chain F</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1h6v

From Proteopedia

Revision as of 14:24, 17 February 2009

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