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Template:STRUCTURE 1jch

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Revision as of 06:29, 18 February 2009

1jch, resolution 3.02Å ()

Ligands:

Domains:

Cytotoxic, Cloacin, Cloacin_immun

Related:

3eip, 1e44

Structural annotation:
Resources:	CATH : 1Jchb00, 1Jchd00 InterPro : Ipr009105, Ipr003058, Ipr003063 Pfam : PF03515, PF09000, PF03513 SCOP : d1jcha3, d1jcha2, d1jcha1, d1jchb_, d1jchc2, d1jchc3, d1jchc1, d1jchd_ UniProt : P00646, P02984

Functional annotation:
Cellular component:	extrachromosomal circular DNA
Biological process:	pathogenesis cytolysis defense response to bacterium bacteriocin immunity
Molecular function:	nucleic acid binding ribosome binding receptor binding nuclease activity endonuclease activity hydrolase activity hydrolase activity, acting on ester bonds RNA binding protein binding toxin binding

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1jch"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1jch, resolution 3.02&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1jch]], resolution 3.02&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
 |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09000 Cytotoxic], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03515 Cloacin], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03513 Cloacin_immun]</span>
@@ Line 9: / Line 9: @@
 |COMPONENT={{GO|id=GO:0005727 | text = extrachromosomal circular DNA}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1jchB00 1Jchb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1jchD00 1Jchd00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009105 Ipr009105], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003063 Ipr003063]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03515 PF03515], [http://pfam.sanger.ac.uk/family?acc=PF09000 PF09000], [http://pfam.sanger.ac.uk/family?acc=PF03513 PF03513]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=66493 d1jcha3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=66492 d1jcha2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=66491 d1jcha1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=66494 d1jchb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=66496 d1jchc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=66497 d1jchc3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=66495 d1jchc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=66498 d1jchd_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00646 P00646], [http://ca.expasy.org/cgi-bin/niceprot.pl?P02984 P02984]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1jch_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>C [x]</text>
+<name>jmb_1jch_C</name>
+<title>toggle chain C</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1jch_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>D [x]</text>
+<name>jmb_1jch_D</name>
+<title>toggle chain D</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1jch

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Revision as of 06:29, 18 February 2009

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