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3ic3
From Proteopedia
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| - | {{Seed}} | ||
| - | [[Image:3ic3.jpg|left|200px]] | ||
| - | + | ==Structure of a putative pyruvate dehydrogenase from the photosynthetic bacterium Rhodopseudomonas palustrus CGA009== | |
| - | + | <StructureSection load='3ic3' size='340' side='right'caption='[[3ic3]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3ic3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"rhodobacillus_palustris"_molisch_1907 "rhodobacillus palustris" molisch 1907]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IC3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IC3 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">JGI_07::RPA2865, RPA2865 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1076 "Rhodobacillus palustris" Molisch 1907])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ic3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ic3 OCA], [https://pdbe.org/3ic3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ic3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ic3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ic3 ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | == | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [[Category: | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ic/3ic3_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Cuff, M E | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Harwood,C S | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Jedrzejczak, R | + | </jmolCheckbox> |
| - | [[Category: Joachimiak, A | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ic3 ConSurf]. |
| - | [[Category: | + | <div style="clear:both"></div> |
| - | [[Category: Mckinlay, J B | + | __TOC__ |
| - | [[Category: Tesar, C | + | </StructureSection> |
| + | [[Category: Rhodobacillus palustris molisch 1907]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Cuff, M E]] | ||
| + | [[Category: Harwood, C S]] | ||
| + | [[Category: Jedrzejczak, R]] | ||
| + | [[Category: Joachimiak, A]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Mckinlay, J B]] | ||
| + | [[Category: Tesar, C]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: Midwest center for structural genomic]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
[[Category: Pyruvate dehydrogenase]] | [[Category: Pyruvate dehydrogenase]] | ||
[[Category: Rhodopseudomonas palustri]] | [[Category: Rhodopseudomonas palustri]] | ||
| - | [[Category: Structural genomic]] | ||
| - | |||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 23 08:59:30 2009'' | ||
Current revision
Structure of a putative pyruvate dehydrogenase from the photosynthetic bacterium Rhodopseudomonas palustrus CGA009
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